EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0016018 (Gene tree)
Gene ID: -
Gene Symbol: Boll
Alias: 4930554P13Rik|4930597B14Rik
Full Name: bol%2C boule-like (Drosophila)
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Minus strand
Length: 124408 bases
Position: chr1:53064446-53188853
Accession: 1922638
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0019878	RRM_1	PF00076.22	3.5e-20	1	1
MGP_AJ_P0019874	RRM_1	PF00076.22	1.7e-19	1	1
MGP_AJ_P0019877	RRM_1	PF00076.22	1.8e-19	1	1
MGP_AJ_P0019878	RRM_3	PF08777.11	0.00013	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0019879	-	147	-	-	- (aa)	-	-
MGP_AJ_T0019878	-	658	-	MGP_AJ_P0019878	132 (aa)	-	-
MGP_AJ_T0019875	-	751	-	MGP_AJ_P0019875	87 (aa)	-	-
MGP_AJ_T0019874	-	2635	-	MGP_AJ_P0019874	282 (aa)	-	-
MGP_AJ_T0019877	-	882	-	MGP_AJ_P0019877	293 (aa)	-	-
MGP_AJ_T0019876	-	1106	-	MGP_AJ_P0019876	160 (aa)	-	-
MGP_AJ_T0019873	-	525	XM_006496310	MGP_AJ_P0019873	37 (aa)	XP_006496373	Q924M5

Gene Model

Click here to download MGP_AJ_G0016018's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0016018's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0016018	Boll	65	32.857	MGP_AJ_G0018892	Msi2	50	33.333
MGP_AJ_G0016018	Boll	51	34.783	MGP_AJ_G0029746	Hnrnpd	69	35.294
MGP_AJ_G0016018	Boll	57	32.000	MGP_AJ_G0025309	Celf2	61	35.714
MGP_AJ_G0016018	Boll	64	33.333	MGP_AJ_G0030704	Hnrnpa2b1	69	31.776
MGP_AJ_G0016018	Boll	58	32.911	MGP_AJ_G0032196	Snrnp70	52	35.000
MGP_AJ_G0016018	Boll	65	36.782	MGP_AJ_G0035731	Rbmx	79	36.782
MGP_AJ_G0016018	Boll	50	43.939	MGP_AJ_G0019438	Rbfox3	72	31.429
MGP_AJ_G0016018	Boll	83	44.186	MGP_AJ_G0017470	Dazap1	77	39.744