EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0016025 (Gene tree)
Gene ID: -
Gene Symbol: Spats2l
Alias: 2810022L02Rik|A230104H11Rik|AA987173|AI480531|AI842453|AW413586
Full Name: spermatogenesis associated%2C serine-rich 2-like
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Plus strand
Length: 172578 bases
Position: chr1:55596008-55768585
Accession: 1914448
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0019912	DUF1387	PF07139.11	2.6e-128	1	1
MGP_AJ_P0019908	DUF1387	PF07139.11	1.8e-75	1	2
MGP_AJ_P0019908	DUF1387	PF07139.11	1.8e-75	2	2
MGP_AJ_P0019905	DUF1387	PF07139.11	3e-28	1	1
MGP_AJ_P0019907	DUF1387	PF07139.11	3.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0019912	-	1947	-	MGP_AJ_P0019912	648 (aa)	-	-
MGP_AJ_T0019913	-	325	-	-	- (aa)	-	-
MGP_AJ_T0019910	-	417	-	-	- (aa)	-	-
MGP_AJ_T0019911	-	384	-	-	- (aa)	-	-
MGP_AJ_T0019905	-	1021	-	MGP_AJ_P0019905	244 (aa)	-	-
MGP_AJ_T0019904	-	655	-	-	- (aa)	-	-
MGP_AJ_T0019907	-	691	-	MGP_AJ_P0019907	130 (aa)	-	-
MGP_AJ_T0019906	-	1207	-	-	- (aa)	-	-
MGP_AJ_T0019903	-	823	XM_006496210	MGP_AJ_P0019903	108 (aa)	XP_006496273	Q91WJ7
MGP_AJ_T0019909	-	2348	-	-	- (aa)	-	-
MGP_AJ_T0019908	-	965	-	MGP_AJ_P0019908	270 (aa)	-	-

Gene Model

Click here to download MGP_AJ_G0016025's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0016025's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0016025	Spats2l	85	50.450	MGP_AJ_G0022282	Spats2	68	48.698