EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0016281 (Gene tree)
Gene ID: -
Gene Symbol: Lrrfip1
Alias: AU024550|FLAP (FLI LRR associated protein)|Flap|Fliiap1
Full Name: leucine rich repeat (in FLII) interacting protein 1
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Plus strand
Length: 134813 bases
Position: chr1:89189676-89324488
Accession: 1342770
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0021251	LRRFIP	PF09738.9	7.9e-106	1	1
MGP_AJ_P0021254	LRRFIP	PF09738.9	7e-90	1	2
MGP_AJ_P0021254	LRRFIP	PF09738.9	7e-90	2	2
MGP_AJ_P0021256	LRRFIP	PF09738.9	7.8e-90	1	3
MGP_AJ_P0021256	LRRFIP	PF09738.9	7.8e-90	2	3
MGP_AJ_P0021256	LRRFIP	PF09738.9	7.8e-90	3	3
MGP_AJ_P0021252	LRRFIP	PF09738.9	1.2e-89	1	2
MGP_AJ_P0021252	LRRFIP	PF09738.9	1.2e-89	2	2
MGP_AJ_P0021253	LRRFIP	PF09738.9	3.5e-84	1	1
MGP_AJ_P0021250	LRRFIP	PF09738.9	1.6e-81	1	3
MGP_AJ_P0021250	LRRFIP	PF09738.9	1.6e-81	2	3
MGP_AJ_P0021250	LRRFIP	PF09738.9	1.6e-81	3	3
MGP_AJ_P0021249	LRRFIP	PF09738.9	6.8e-66	1	2
MGP_AJ_P0021249	LRRFIP	PF09738.9	6.8e-66	2	2
MGP_AJ_P0021255	LRRFIP	PF09738.9	1.9e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0021256	-	2152	-	MGP_AJ_P0021256	662 (aa)	-	-
MGP_AJ_T0021249	-	1031	XM_006529175	MGP_AJ_P0021249	323 (aa)	XP_006529238	Q3UZ39
MGP_AJ_T0021257	-	2595	-	-	- (aa)	-	-
MGP_AJ_T0021254	-	2760	-	MGP_AJ_P0021254	628 (aa)	-	-
MGP_AJ_T0021255	-	447	-	MGP_AJ_P0021255	98 (aa)	-	-
MGP_AJ_T0021252	-	2879	-	MGP_AJ_P0021252	638 (aa)	-	-
MGP_AJ_T0021253	-	3645	-	MGP_AJ_P0021253	729 (aa)	-	-
MGP_AJ_T0021250	-	1744	-	MGP_AJ_P0021250	574 (aa)	-	-
MGP_AJ_T0021251	-	2050	-	MGP_AJ_P0021251	428 (aa)	-	-
MGP_AJ_T0021260	-	483	-	-	- (aa)	-	-
MGP_AJ_T0021258	-	607	-	-	- (aa)	-	-
MGP_AJ_T0021259	-	215	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_AJ_G0016281's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0016281's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0016281	Lrrfip1	99	60.890	MGP_AJ_G0035351	Lrrfip2	100	67.630