EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0016395 (Gene tree)
Gene ID: -
Gene Symbol: Ddx18
Alias: 2310005B10Rik
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 18
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Minus strand
Length: 14125 bases
Position: chr1:119922994-119937118
Accession: 1914192
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0021769	ResIII	PF04851.15	4.6e-06	1	1
MGP_AJ_P0021769	DEAD	PF00270.29	1.7e-45	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0021771	-	512	-	MGP_AJ_P0021771	170 (aa)	-	-
MGP_AJ_T0021770	-	622	-	-	- (aa)	-	-
MGP_AJ_T0021772	-	451	-	-	- (aa)	-	-
MGP_AJ_T0021769	-	2258	XM_006529794	MGP_AJ_P0021769	660 (aa)	XP_006529857	Q8K363

Gene Model

Click here to download MGP_AJ_G0016395's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0016395's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0016395	Ddx18	50	33.134	MGP_AJ_G0019281	Ddx5	74	31.699
MGP_AJ_G0016395	Ddx18	50	30.628	MGP_AJ_G0029856	Ddx51	59	31.070
MGP_AJ_G0016395	Ddx18	57	34.351	MGP_AJ_G0017281	Ddx50	64	30.063
MGP_AJ_G0016395	Ddx18	56	36.148	MGP_AJ_G0033682	Ddx49	92	38.066
MGP_AJ_G0016395	Ddx18	68	36.326	MGP_AJ_G0030065	Ddx55	77	36.175
MGP_AJ_G0016395	Ddx18	53	33.155	MGP_AJ_G0035549	Ddx3x	56	33.422
MGP_AJ_G0016395	Ddx18	53	33.155	MGP_AJ_G0016900	D1Pas1	56	33.155
MGP_AJ_G0016395	Ddx18	55	38.525	MGP_AJ_G0031388	Ddx47	88	37.705
MGP_AJ_G0016395	Ddx18	53	33.144	MGP_AJ_G0016524	Ddx59	55	33.144
MGP_AJ_G0016395	Ddx18	61	38.462	MGP_AJ_G0026873	Ddx27	53	38.221
MGP_AJ_G0016395	Ddx18	65	36.327	MGP_AJ_G0025510	Ddx31	72	36.327
MGP_AJ_G0016395	Ddx18	64	32.294	MGP_AJ_G0029973	Ddx54	50	32.366
MGP_AJ_G0016395	Ddx18	55	32.990	MGP_AJ_G0018830	Ddx52	68	31.935
MGP_AJ_G0016395	Ddx18	50	34.111	MGP_AJ_G0020556	Ddx41	54	34.111
MGP_AJ_G0016395	Ddx18	51	30.769	MGP_AJ_G0033822	Ddx39	81	30.312
MGP_AJ_G0016395	Ddx18	66	46.241	MGP_AJ_G0034788	Ddx10	50	46.241
MGP_AJ_G0016395	Ddx18	52	33.333	MGP_AJ_G0022038	Ddx17	53	33.333
MGP_AJ_G0016395	Ddx18	56	34.974	MGP_AJ_G0035049	Ddx43	55	34.974