EuRBPDB

Description

Ensembl ID: MGP_AJ_G0016579 (Gene tree)
Gene ID: -
Gene Symbol: Dhx9
Alias: AI326842|Ddx9|HEL-5|NDH II|NDHII|RHA|RNA helicase|leukophysin|mHEL-5|nuclear DNA helicase II
Full Name: DEAH (Asp-Glu-Ala-His) box polypeptide 9
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Minus strand
Length: 31903 bases
Position: chr1:151901694-151933596
Accession: 108177
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0022652	dsrm	PF00035.26	9.9e-27	1	2
MGP_AJ_P0022652	dsrm	PF00035.26	9.9e-27	2	2
MGP_AJ_P0022649	dsrm	PF00035.26	3.7e-26	1	2
MGP_AJ_P0022649	dsrm	PF00035.26	3.7e-26	2	2
MGP_AJ_P0022648	dsrm	PF00035.26	3.7e-26	1	2
MGP_AJ_P0022648	dsrm	PF00035.26	3.7e-26	2	2
MGP_AJ_P0022652	DEAD	PF00270.29	2.4e-06	1	1
MGP_AJ_P0022648	DEAD	PF00270.29	7.7e-06	1	1
MGP_AJ_P0022649	DEAD	PF00270.29	7.8e-06	1	1
MGP_AJ_P0022648	HA2	PF04408.23	1.2e-14	1	1
MGP_AJ_P0022649	HA2	PF04408.23	1.2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0022656	-	1604	-	-	- (aa)	-	-
MGP_AJ_T0022655	-	2274	-	-	- (aa)	-	-
MGP_AJ_T0022654	-	2658	-	-	- (aa)	-	-
MGP_AJ_T0022653	-	658	-	-	- (aa)	-	-
MGP_AJ_T0022652	-	2346	-	MGP_AJ_P0022652	735 (aa)	-	-
MGP_AJ_T0022651	-	2018	-	MGP_AJ_P0022651	46 (aa)	-	-
MGP_AJ_T0022650	-	2406	-	MGP_AJ_P0022650	459 (aa)	-	-
MGP_AJ_T0022648	-	4561	XM_011247918	MGP_AJ_P0022648	1383 (aa)	XP_011246220	A0A087WPL5
MGP_AJ_T0022649	-	4616	-	MGP_AJ_P0022649	1384 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0016579	Dhx9	52	40.153	MGP_AJ_G0035322	Dhx30	62	32.861
MGP_AJ_G0016579	Dhx9	54	35.915	MGP_AJ_G0024017	Dhx57	63	35.681
MGP_AJ_G0016579	Dhx9	56	47.685	MGP_AJ_G0024369	Ythdc2	90	35.912
MGP_AJ_G0016579	Dhx9	53	38.034	MGP_AJ_G0027219	Dhx36	76	37.613
MGP_AJ_G0016579	Dhx9	54	32.518	MGP_AJ_G0026767	Dhx35	52	31.051
MGP_AJ_G0016579	Dhx9	58	32.593	MGP_AJ_G0020892	Dhx29	62	32.047