EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0017281 (Gene tree)
Gene ID: -
Gene Symbol: Ddx50
Alias: 4933429B04Rik|8430408E17Rik|GU2|RH-II|RH-II/Gubeta
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 50
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Minus strand
Length: 35272 bases
Position: chr10:60157325-60192596
Accession: 2182303
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0025442	GUCT	PF08152.12	4.8e-28	1	1
MGP_AJ_P0025442	ResIII	PF04851.15	5.8e-10	1	1
MGP_AJ_P0025442	DEAD	PF00270.29	1.9e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0025442	-	2527	-	MGP_AJ_P0025442	734 (aa)	-	-
MGP_AJ_T0025441	-	2778	XM_006514345	MGP_AJ_P0025441	720 (aa)	XP_006514408	Q99MJ9

Gene Model

Click here to download MGP_AJ_G0017281's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0017281's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0017281	Ddx50	50	32.353	MGP_AJ_G0019446	Eif4a3	86	32.353
MGP_AJ_G0017281	Ddx50	91	61.280	MGP_AJ_G0017280	Ddx21	71	64.217
MGP_AJ_G0017281	Ddx50	54	31.204	MGP_AJ_G0031388	Ddx47	94	30.175
MGP_AJ_G0017281	Ddx50	57	30.073	MGP_AJ_G0035049	Ddx43	54	33.799
MGP_AJ_G0017281	Ddx50	50	33.962	MGP_AJ_G0022038	Ddx17	55	33.962
MGP_AJ_G0017281	Ddx50	64	30.063	MGP_AJ_G0016395	Ddx18	57	34.351
MGP_AJ_G0017281	Ddx50	64	31.078	MGP_AJ_G0026873	Ddx27	52	34.129