EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0017367 (Gene tree)
Gene ID: -
Gene Symbol: Pcbp3
Alias: AlphaCP-3
Full Name: poly(rC) binding protein 3
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Minus strand
Length: 203423 bases
Position: chr10:74361418-74564840
Accession: 1890470
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0025836	KH_1	PF00013.29	2.9e-55	1	3
MGP_AJ_P0025836	KH_1	PF00013.29	2.9e-55	2	3
MGP_AJ_P0025836	KH_1	PF00013.29	2.9e-55	3	3
MGP_AJ_P0025833	KH_1	PF00013.29	3e-55	1	3
MGP_AJ_P0025833	KH_1	PF00013.29	3e-55	2	3
MGP_AJ_P0025833	KH_1	PF00013.29	3e-55	3	3
MGP_AJ_P0025835	KH_1	PF00013.29	3e-55	1	3
MGP_AJ_P0025835	KH_1	PF00013.29	3e-55	2	3
MGP_AJ_P0025835	KH_1	PF00013.29	3e-55	3	3
MGP_AJ_P0025838	KH_1	PF00013.29	7.7e-19	1	1
MGP_AJ_P0025836	KH_2	PF07650.17	3.9e-15	1	1
MGP_AJ_P0025833	KH_2	PF07650.17	3.9e-15	1	1
MGP_AJ_P0025835	KH_2	PF07650.17	3.9e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0025841	-	337	-	-	- (aa)	-	-
MGP_AJ_T0025840	-	717	-	-	- (aa)	-	-
MGP_AJ_T0025832	-	2011	XM_006513916	MGP_AJ_P0025832	394 (aa)	XP_006513979	P57722
MGP_AJ_T0025833	-	2013	-	MGP_AJ_P0025833	371 (aa)	-	-
MGP_AJ_T0025836	-	2544	-	MGP_AJ_P0025836	370 (aa)	-	-
MGP_AJ_T0025837	-	1095	-	-	- (aa)	-	-
MGP_AJ_T0025834	-	1736	-	-	- (aa)	-	-
MGP_AJ_T0025835	-	1748	-	MGP_AJ_P0025835	371 (aa)	-	-
MGP_AJ_T0025838	-	605	-	MGP_AJ_P0025838	160 (aa)	-	-
MGP_AJ_T0025839	-	944	-	MGP_AJ_P0025839	226 (aa)	-	-

Gene Model

Click here to download MGP_AJ_G0017367's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0017367's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0017367	Pcbp3	85	69.811	MGP_AJ_G0035211	Pcbp4	93	70.652
MGP_AJ_G0017367	Pcbp3	99	65.873	MGP_AJ_G0030944	Pcbp1	99	68.033
MGP_AJ_G0017367	Pcbp3	72	40.351	MGP_AJ_G0019678	Nova1	59	40.351
MGP_AJ_G0017367	Pcbp3	66	31.250	MGP_AJ_G0027947	Fubp1	71	33.019
MGP_AJ_G0017367	Pcbp3	89	36.765	MGP_AJ_G0022628	Igf2bp2	62	33.333
MGP_AJ_G0017367	Pcbp3	99	82.143	MGP_AJ_G0022377	Pcbp2	99	78.338
MGP_AJ_G0017367	Pcbp3	66	33.582	MGP_AJ_G0018961	Igf2bp1	60	33.333
MGP_AJ_G0017367	Pcbp3	81	41.667	MGP_AJ_G0020587	Hnrnpk	70	51.316
MGP_AJ_G0017367	Pcbp3	85	31.973	MGP_AJ_G0025564	Fubp3	77	31.973
MGP_AJ_G0017367	Pcbp3	86	35.000	MGP_AJ_G0030692	Igf2bp3	59	33.813