EuRBPDB

Description

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0026179	RRM_1	PF00076.22	5.1e-26	1	1
MGP_AJ_P0026181	RRM_1	PF00076.22	1.2e-25	1	1
MGP_AJ_P0026180	RRM_1	PF00076.22	1.3e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0026183	-	912	-	-	- (aa)	-	-
MGP_AJ_T0026182	-	376	-	-	- (aa)	-	-
MGP_AJ_T0026181	-	834	-	MGP_AJ_P0026181	168 (aa)	-	-
MGP_AJ_T0026180	-	1321	-	MGP_AJ_P0026180	172 (aa)	-	-
MGP_AJ_T0026185	-	593	-	-	- (aa)	-	-
MGP_AJ_T0026184	-	894	-	-	- (aa)	-	-
MGP_AJ_T0026179	-	423	XM_006513164	MGP_AJ_P0026179	108 (aa)	XP_006513227	P60824

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0017464	Cirbp	68	30.137	MGP_AJ_G0024638	Rbm4b	79	30.882
MGP_AJ_G0017464	Cirbp	92	42.105	MGP_AJ_G0017470	Dazap1	74	47.273
MGP_AJ_G0017464	Cirbp	79	63.529	MGP_AJ_G0035731	Rbmx	83	63.529
MGP_AJ_G0017464	Cirbp	68	34.247	MGP_AJ_G0021356	Pspc1	69	41.304
MGP_AJ_G0017464	Cirbp	84	31.868	MGP_AJ_G0026779	Srsf6	61	31.868
MGP_AJ_G0017464	Cirbp	85	38.043	MGP_AJ_G0022690	Ncbp2	54	36.471
MGP_AJ_G0017464	Cirbp	91	39.759	MGP_AJ_G0026800	Pabpc1l	53	39.759
MGP_AJ_G0017464	Cirbp	82	33.333	MGP_AJ_G0033314	Elavl1	75	33.333
MGP_AJ_G0017464	Cirbp	94	38.614	MGP_AJ_G0020581	Hnrnpa0	56	43.421
MGP_AJ_G0017464	Cirbp	78	40.476	MGP_AJ_G0026919	Rbm38	74	38.043
MGP_AJ_G0017464	Cirbp	99	60.588	MGP_AJ_G0035518	Rbm3	100	63.529
MGP_AJ_G0017464	Cirbp	76	46.875	MGP_AJ_G0025834	-	60	48.333
MGP_AJ_G0017464	Cirbp	88	43.243	MGP_AJ_G0018892	Msi2	61	41.429
MGP_AJ_G0017464	Cirbp	76	37.500	MGP_AJ_G0028407	Elavl2	64	37.500
MGP_AJ_G0017464	Cirbp	80	32.558	MGP_AJ_G0025309	Celf2	82	33.333
MGP_AJ_G0017464	Cirbp	87	40.351	MGP_AJ_G0029933	Msi1	51	38.983
MGP_AJ_G0017464	Cirbp	84	38.889	MGP_AJ_G0028539	Elavl4	70	38.889
MGP_AJ_G0017464	Cirbp	70	44.737	MGP_AJ_G0030704	Hnrnpa2b1	50	44.737
MGP_AJ_G0017464	Cirbp	79	62.353	MGP_AJ_G0033788	-	65	55.455
MGP_AJ_G0017464	Cirbp	91	35.714	MGP_AJ_G0030941	Tia1	80	37.778
MGP_AJ_G0017464	Cirbp	73	36.709	MGP_AJ_G0029748	Hnrnpdl	54	36.709
MGP_AJ_G0017464	Cirbp	83	38.776	MGP_AJ_G0029746	Hnrnpd	84	36.559
MGP_AJ_G0017464	Cirbp	79	37.500	MGP_AJ_G0034452	Elavl3	62	37.500
MGP_AJ_G0017464	Cirbp	85	40.244	MGP_AJ_G0033065	Tial1	67	40.244