EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0017538 (Gene tree)
Gene ID: -
Gene Symbol: Celf5
Alias: 4930565A21Rik|Brunol5
Full Name: CUGBP%2C Elav-like family member 5
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Minus strand
Length: 23488 bases
Position: chr10:79264646-79288133
Accession: 2442333
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0026460	RRM_1	PF00076.22	1.5e-50	1	3
MGP_AJ_P0026460	RRM_1	PF00076.22	1.5e-50	2	3
MGP_AJ_P0026460	RRM_1	PF00076.22	1.5e-50	3	3
MGP_AJ_P0026464	RRM_1	PF00076.22	2.9e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0026460	-	4325	XM_006513743	MGP_AJ_P0026460	446 (aa)	XP_006513806	D3Z4C5
MGP_AJ_T0026461	-	605	-	-	- (aa)	-	-
MGP_AJ_T0026462	-	945	-	-	- (aa)	-	-
MGP_AJ_T0026463	-	748	-	-	- (aa)	-	-
MGP_AJ_T0026464	-	442	-	MGP_AJ_P0026464	92 (aa)	-	-

Gene Model

Click here to download MGP_AJ_G0017538's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0017538's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0017538	Celf5	98	38.554	MGP_AJ_G0024336	Pabpc2	63	38.554
MGP_AJ_G0017538	Celf5	89	32.184	MGP_AJ_G0030941	Tia1	88	34.568
MGP_AJ_G0017538	Celf5	93	59.770	MGP_AJ_G0025309	Celf2	92	53.659
MGP_AJ_G0017538	Celf5	71	39.759	MGP_AJ_G0021757	Pabpc1	52	39.759
MGP_AJ_G0017538	Celf5	89	30.120	MGP_AJ_G0028539	Elavl4	74	37.500
MGP_AJ_G0017538	Celf5	78	36.250	MGP_AJ_G0017824	Rbms2	77	36.250
MGP_AJ_G0017538	Celf5	93	80.645	MGP_AJ_G0034883	Celf6	75	84.783
MGP_AJ_G0017538	Celf5	70	32.812	MGP_AJ_G0026800	Pabpc1l	60	35.870
MGP_AJ_G0017538	Celf5	93	56.322	MGP_AJ_G0026098	Celf1	98	44.650
MGP_AJ_G0017538	Celf5	93	76.842	MGP_AJ_G0024174	Celf4	97	65.795
MGP_AJ_G0017538	Celf5	91	31.765	MGP_AJ_G0034452	Elavl3	77	38.272
MGP_AJ_G0017538	Celf5	59	41.975	MGP_AJ_G0033314	Elavl1	79	41.975
MGP_AJ_G0017538	Celf5	57	42.105	MGP_AJ_G0035381	Rbms3	93	36.134
MGP_AJ_G0017538	Celf5	66	34.426	MGP_AJ_G0036025	Pabpc5	70	35.955
MGP_AJ_G0017538	Celf5	57	32.407	MGP_AJ_G0021932	Puf60	81	32.407
MGP_AJ_G0017538	Celf5	97	30.857	MGP_AJ_G0028407	Elavl2	97	30.857
MGP_AJ_G0017538	Celf5	93	76.744	MGP_AJ_G0027512	Celf3	100	66.848