EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0017583 (Gene tree)
Gene ID: -
Gene Symbol: Prdm4
Alias: 1700031E19Rik|2810470D21Rik|AW552272|SC-1|SC1
Full Name: PR domain containing 4
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Minus strand
Length: 25451 bases
Position: chr10:83935691-83961141
Accession: 1920093
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0026639	zf-C2H2	PF00096.26	3.6e-20	1	2
MGP_AJ_P0026639	zf-C2H2	PF00096.26	3.6e-20	2	2
MGP_AJ_P0026639	zf-met	PF12874.7	0.00021	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0026639	-	3917	-	MGP_AJ_P0026639	803 (aa)	-	-
MGP_AJ_T0026638	-	3508	-	MGP_AJ_P0026638	700 (aa)	-	-
MGP_AJ_T0026635	-	2948	XM_006514193	MGP_AJ_P0026635	592 (aa)	XP_006514256	Q80V63
MGP_AJ_T0026637	-	3790	-	MGP_AJ_P0026637	780 (aa)	-	-
MGP_AJ_T0026636	-	3507	-	MGP_AJ_P0026636	690 (aa)	-	-

Gene Model

Click here to download MGP_AJ_G0017583's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0017583's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0017583	Prdm4	61	36.486	MGP_AJ_G0025565	Prdm12	68	36.486
MGP_AJ_G0017583	Prdm4	75	44.355	MGP_AJ_G0023214	Zfp945	76	44.444
MGP_AJ_G0017583	Prdm4	59	38.158	MGP_AJ_G0030801	Prdm5	99	38.194