EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0017735 (Gene tree)
Gene ID: -
Gene Symbol: Cpsf6
Alias: 4733401N12Rik|AI256641|CFIM|CFIM68|HPBRII-4|HPBRII-7
Full Name: cleavage and polyadenylation specific factor 6
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Minus strand
Length: 35797 bases
Position: chr10:115552607-115588403
Accession: 1913948
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0027134	RRM_1	PF00076.22	2.1e-06	1	1
MGP_AJ_P0027138	RRM_1	PF00076.22	2.1e-06	1	1
MGP_AJ_P0027135	RRM_1	PF00076.22	2.1e-06	1	1
MGP_AJ_P0027136	RRM_1	PF00076.22	2.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0027140	-	2753	-	-	- (aa)	-	-
MGP_AJ_T0027141	-	377	-	MGP_AJ_P0027141	91 (aa)	-	-
MGP_AJ_T0027135	-	2200	-	MGP_AJ_P0027135	552 (aa)	-	-
MGP_AJ_T0027134	-	6525	XM_006513851	MGP_AJ_P0027134	551 (aa)	XP_006513914	Q6NVF9
MGP_AJ_T0027137	-	717	-	MGP_AJ_P0027137	182 (aa)	-	-
MGP_AJ_T0027136	-	2227	-	MGP_AJ_P0027136	588 (aa)	-	-
MGP_AJ_T0027139	-	449	-	MGP_AJ_P0027139	38 (aa)	-	-
MGP_AJ_T0027138	-	3820	-	MGP_AJ_P0027138	551 (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0017735's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0017735	Cpsf6	65	55.385	MGP_AJ_G0024815	Cpsf7	71	58.857