EuRBPDB

Description

Ensembl ID: MGP_AJ_G0017927 (Gene tree)
Gene ID: -
Gene Symbol: Patz1
Alias: 8430401L15Rik|AI447519|MAZR|Mazr|POZ-AT hook-zinc finger protein|Patz|Zfp278|Zfp278GN|mazr
Full Name: POZ (BTB) and AT hook containing zinc finger 1
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Plus strand
Length: 20003 bases
Position: chr11:202099-222101
Accession: 1891832
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0027643	zf-C2H2	PF00096.26	3.9e-26	1	5
MGP_AJ_P0027643	zf-C2H2	PF00096.26	3.9e-26	2	5
MGP_AJ_P0027643	zf-C2H2	PF00096.26	3.9e-26	3	5
MGP_AJ_P0027643	zf-C2H2	PF00096.26	3.9e-26	4	5
MGP_AJ_P0027643	zf-C2H2	PF00096.26	3.9e-26	5	5
MGP_AJ_P0027644	zf-C2H2	PF00096.26	1.9e-16	1	3
MGP_AJ_P0027644	zf-C2H2	PF00096.26	1.9e-16	2	3
MGP_AJ_P0027644	zf-C2H2	PF00096.26	1.9e-16	3	3
MGP_AJ_P0027642	zf-C2H2	PF00096.26	2.2e-15	1	3
MGP_AJ_P0027642	zf-C2H2	PF00096.26	2.2e-15	2	3
MGP_AJ_P0027642	zf-C2H2	PF00096.26	2.2e-15	3	3
MGP_AJ_P0027643	zf-met	PF12874.7	3.7e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0027637	-	790	NR_045109	-	- (aa)	-	-
MGP_AJ_T0027638	-	1853	-	-	- (aa)	-	-
MGP_AJ_T0027639	-	844	-	-	- (aa)	-	-
MGP_AJ_T0027647	-	652	-	-	- (aa)	-	-
MGP_AJ_T0027646	-	456	-	-	- (aa)	-	-
MGP_AJ_T0027645	-	1249	-	-	- (aa)	-	-
MGP_AJ_T0027644	-	3173	-	MGP_AJ_P0027644	537 (aa)	-	-
MGP_AJ_T0027643	-	3659	-	MGP_AJ_P0027643	687 (aa)	-	-
MGP_AJ_T0027642	-	2887	-	MGP_AJ_P0027642	537 (aa)	-	-
MGP_AJ_T0027641	-	1904	-	MGP_AJ_P0027641	102 (aa)	-	-
MGP_AJ_T0027640	-	3749	-	MGP_AJ_P0027640	641 (aa)	-	-
MGP_AJ_T0027648	-	495	-	MGP_AJ_P0027648	70 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0017927	Patz1	88	36.232	MGP_AJ_G0023955	Zbtb14	90	38.889