EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0018114 (Gene tree)
Gene ID: -
Gene Symbol: Npm1
Alias: B23|NO38|Npm|nucleolar protein NO38
Full Name: nucleophosmin 1
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Minus strand
Length: 10877 bases
Position: chr11:30234808-30245684
Accession: 106184
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0028469	Nucleoplasmin	PF03066.15	3.2e-41	1	1
MGP_AJ_P0028471	Nucleoplasmin	PF03066.15	1.9e-40	1	1
MGP_AJ_P0028472	Nucleoplasmin	PF03066.15	2.5e-40	1	1
MGP_AJ_P0028468	Nucleoplasmin	PF03066.15	2.6e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0028468	-	1600	-	MGP_AJ_P0028468	280 (aa)	-	Q61937
MGP_AJ_T0028469	-	1311	-	MGP_AJ_P0028469	302 (aa)	-	-
MGP_AJ_T0028471	-	1121	-	MGP_AJ_P0028471	245 (aa)	-	-
MGP_AJ_T0028470	-	825	-	-	- (aa)	-	-
MGP_AJ_T0028473	-	450	-	-	- (aa)	-	-
MGP_AJ_T0028472	-	930	-	MGP_AJ_P0028472	273 (aa)	-	-

Gene Model

Click here to download MGP_AJ_G0018114's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0018114's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0018114	Npm1	97	91.544	MGP_AJ_G0034349	Gm5611	100	86.986