EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0018178 (Gene tree)
Gene ID: -
Gene Symbol: Irgm1
Alias: Ifggd3|Ifi1|Iigp3|Iipg3|Irgm|LRG-47
Full Name: immunity-related GTPase family M member 1
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Minus strand
Length: 9746 bases
Position: chr11:45985939-45995684
Accession: 107567
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0028704	MMR_HSR1	PF01926.23	5.6e-05	1	1
MGP_AJ_P0028703	MMR_HSR1	PF01926.23	9.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0028703	-	2259	-	MGP_AJ_P0028703	409 (aa)	-	-
MGP_AJ_T0028702	-	3832	-	-	- (aa)	-	-
MGP_AJ_T0028704	-	1213	-	MGP_AJ_P0028704	288 (aa)	-	-

Gene Model

Click here to download MGP_AJ_G0018178's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0018178's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0018178	Irgm1	84	36.842	MGP_AJ_G0024424	-	85	36.842
MGP_AJ_G0018178	Irgm1	75	33.028	MGP_AJ_G0024427	F830016B08Rik	78	33.028
MGP_AJ_G0018178	Irgm1	86	34.118	MGP_AJ_G0024426	Gm4841	70	32.827
MGP_AJ_G0018178	Irgm1	79	36.864	MGP_AJ_G0024425	Gm4951	77	33.013
MGP_AJ_G0018178	Irgm1	82	39.095	MGP_AJ_G0018185	Tgtp2	72	36.667
MGP_AJ_G0018178	Irgm1	82	39.095	MGP_AJ_G0018184	Tgtp1	72	36.667
MGP_AJ_G0018178	Irgm1	89	31.937	MGP_AJ_G0018186	Ifi47	91	31.937
MGP_AJ_G0018178	Irgm1	89	56.031	MGP_AJ_G0018315	Igtp	90	49.740
MGP_AJ_G0018178	Irgm1	83	61.765	MGP_AJ_G0018316	Irgm2	92	49.865
MGP_AJ_G0018178	Irgm1	76	35.169	MGP_AJ_G0031807	Irgc1	71	30.183