EuRBPDB

Description

Ensembl ID: MGP_AJ_G0018217 (Gene tree)
Gene ID: -
Gene Symbol: Hnrnph1
Alias: AI642080|E430005G16Rik|Hnrnph|Hnrph|Hnrph1|Hnrph1 {ECO:0000313|EMBL:AAH42187.2,GN ECO:0000313|MGI:MGI:1891925}
Full Name: heterogeneous nuclear ribonucleoprotein H1
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Plus strand
Length: 9646 bases
Position: chr11:47659201-47668846
Accession: 1891925
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0028825	zf-RNPHF	PF08080.12	1.3e-22	1	1
MGP_AJ_P0028826	zf-RNPHF	PF08080.12	1.3e-22	1	1
MGP_AJ_P0028831	zf-RNPHF	PF08080.12	1.5e-22	1	1
MGP_AJ_P0028825	RRM_1	PF00076.22	2.1e-32	1	3
MGP_AJ_P0028825	RRM_1	PF00076.22	2.1e-32	2	3
MGP_AJ_P0028825	RRM_1	PF00076.22	2.1e-32	3	3
MGP_AJ_P0028826	RRM_1	PF00076.22	2.1e-32	1	3
MGP_AJ_P0028826	RRM_1	PF00076.22	2.1e-32	2	3
MGP_AJ_P0028826	RRM_1	PF00076.22	2.1e-32	3	3
MGP_AJ_P0028831	RRM_1	PF00076.22	2.6e-32	1	3
MGP_AJ_P0028831	RRM_1	PF00076.22	2.6e-32	2	3
MGP_AJ_P0028831	RRM_1	PF00076.22	2.6e-32	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0028828	-	581	-	-	- (aa)	-	-
MGP_AJ_T0028829	-	4002	-	-	- (aa)	-	-
MGP_AJ_T0028826	-	2331	-	MGP_AJ_P0028826	449 (aa)	-	-
MGP_AJ_T0028827	-	4577	-	-	- (aa)	-	-
MGP_AJ_T0028841	-	816	-	-	- (aa)	-	-
MGP_AJ_T0028825	-	2533	XM_006533875	MGP_AJ_P0028825	449 (aa)	XP_006533938	O35737
MGP_AJ_T0028840	-	159	-	-	- (aa)	-	-
MGP_AJ_T0028831	-	2232	-	MGP_AJ_P0028831	472 (aa)	-	-
MGP_AJ_T0028830	-	870	-	-	- (aa)	-	-
MGP_AJ_T0028833	-	860	-	-	- (aa)	-	-
MGP_AJ_T0028832	-	1116	-	-	- (aa)	-	-
MGP_AJ_T0028835	-	1724	-	-	- (aa)	-	-
MGP_AJ_T0028834	-	582	-	-	- (aa)	-	-
MGP_AJ_T0028837	-	582	-	-	- (aa)	-	-
MGP_AJ_T0028836	-	832	-	-	- (aa)	-	-
MGP_AJ_T0028839	-	163	-	-	- (aa)	-	-
MGP_AJ_T0028838	-	915	-	-	- (aa)	-	-
MGP_AJ_T0028842	-	678	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0018217	Hnrnph1	60	64.474	MGP_AJ_G0029677	Grsf1	92	65.333
MGP_AJ_G0018217	Hnrnph1	78	33.333	MGP_AJ_G0028018	-	50	33.333
MGP_AJ_G0018217	Hnrnph1	78	33.333	MGP_AJ_G0028019	-	50	33.333
MGP_AJ_G0018217	Hnrnph1	100	88.641	MGP_AJ_G0027008	Hnrnph2	100	88.641
MGP_AJ_G0018217	Hnrnph1	90	60.923	MGP_AJ_G0017288	Hnrnph3	99	59.673