EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0018249 (Gene tree)
Gene ID: -
Gene Symbol: Cdkl3
Alias: AI852479|B230379H01Rik
Full Name: cyclin-dependent kinase-like 3
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Plus strand
Length: 88355 bases
Position: chr11:49341909-49430263
Accession: 2388268
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0028953	RIO1	PF01163.22	4.4e-05	1	1
MGP_AJ_P0028951	RIO1	PF01163.22	0.00027	1	1
MGP_AJ_P0028945	RIO1	PF01163.22	0.00035	1	1
MGP_AJ_P0028948	RIO1	PF01163.22	0.00035	1	1
MGP_AJ_P0028952	RIO1	PF01163.22	0.00035	1	1
MGP_AJ_P0028946	RIO1	PF01163.22	0.00035	1	1
MGP_AJ_P0028947	RIO1	PF01163.22	0.00035	1	1
MGP_AJ_P0028950	RIO1	PF01163.22	0.00037	1	1
MGP_AJ_P0028955	RIO1	PF01163.22	0.00037	1	1
MGP_AJ_P0028949	RIO1	PF01163.22	0.00037	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0028949	-	2765	-	MGP_AJ_P0028949	595 (aa)	-	-
MGP_AJ_T0028948	-	2051	-	MGP_AJ_P0028948	581 (aa)	-	-
MGP_AJ_T0028954	-	2769	-	MGP_AJ_P0028954	591 (aa)	-	-
MGP_AJ_T0028955	-	2770	-	MGP_AJ_P0028955	610 (aa)	-	-
MGP_AJ_T0028952	-	2008	-	MGP_AJ_P0028952	581 (aa)	-	-
MGP_AJ_T0028953	-	665	-	MGP_AJ_P0028953	192 (aa)	-	-
MGP_AJ_T0028950	-	2749	-	MGP_AJ_P0028950	610 (aa)	-	-
MGP_AJ_T0028951	-	2216	-	MGP_AJ_P0028951	457 (aa)	-	-
MGP_AJ_T0028945	-	2162	XM_006532767	MGP_AJ_P0028945	597 (aa)	XP_006532830	Q8BLF2
MGP_AJ_T0028947	-	2387	-	MGP_AJ_P0028947	585 (aa)	-	-
MGP_AJ_T0028946	-	2063	-	MGP_AJ_P0028946	585 (aa)	-	-
MGP_AJ_T0028956	-	1564	-	MGP_AJ_P0028956	224 (aa)	-	-
MGP_AJ_T0028958	-	631	-	MGP_AJ_P0028958	97 (aa)	-	-
MGP_AJ_T0028957	-	513	-	MGP_AJ_P0028957	137 (aa)	-	-
MGP_AJ_T0028959	-	489	-	MGP_AJ_P0028959	79 (aa)	-	-
MGP_AJ_T0028960	-	467	-	MGP_AJ_P0028960	91 (aa)	-	-

Gene Model

Click here to download MGP_AJ_G0018249's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0018249's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0018249	Cdkl3	90	35.556	MGP_AJ_G0029763	Mapk10	84	37.908
MGP_AJ_G0018249	Cdkl3	88	33.721	MGP_AJ_G0024756	Mark2	87	33.721
MGP_AJ_G0018249	Cdkl3	74	32.168	MGP_AJ_G0023189	Gm6811	51	30.769