EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0018887 (Gene tree)
Gene ID: -
Gene Symbol: Srsf1
Alias: 1110054N12Rik|5730507C05Rik|6330415C05Rik|AI482334|AW491331|Asf|Sf2|Sfrs1
Full Name: serine/arginine-rich splicing factor 1
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Plus strand
Length: 6378 bases
Position: chr11:86252050-86258427
Accession: 98283
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0031513	RRM_1	PF00076.22	6.2e-34	1	2
MGP_AJ_P0031513	RRM_1	PF00076.22	6.2e-34	2	2
MGP_AJ_P0031512	RRM_1	PF00076.22	2.4e-33	1	2
MGP_AJ_P0031512	RRM_1	PF00076.22	2.4e-33	2	2
MGP_AJ_P0031515	RRM_1	PF00076.22	2.6e-33	1	2
MGP_AJ_P0031515	RRM_1	PF00076.22	2.6e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0031514	-	647	-	-	- (aa)	-	-
MGP_AJ_T0031515	-	1209	-	MGP_AJ_P0031515	253 (aa)	-	-
MGP_AJ_T0031516	-	895	-	MGP_AJ_P0031516	105 (aa)	-	-
MGP_AJ_T0031517	-	401	-	MGP_AJ_P0031517	57 (aa)	-	-
MGP_AJ_T0031512	-	5357	-	MGP_AJ_P0031512	248 (aa)	-	Q6PDM2
MGP_AJ_T0031513	-	2948	-	MGP_AJ_P0031513	201 (aa)	-	-
MGP_AJ_T0031518	-	758	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_AJ_G0018887's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0018887's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0018887	Srsf1	80	46.988	MGP_AJ_G0019853	Srsf5	96	51.020
MGP_AJ_G0018887	Srsf1	79	79.762	MGP_AJ_G0029930	Srsf9	78	70.330
MGP_AJ_G0018887	Srsf1	82	42.857	MGP_AJ_G0026779	Srsf6	58	40.670