EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0018892 (Gene tree)
Gene ID: -
Gene Symbol: Msi2
Alias: 1700105C15Rik|AI451722|AI563628|AW489193|Msi2h|Musashi2|msi2h
Full Name: musashi RNA-binding protein 2
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Minus strand
Length: 382581 bases
Position: chr11:86559282-86941862
Accession: 1923876
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0031534	RRM_1	PF00076.22	6.3e-34	1	2
MGP_AJ_P0031534	RRM_1	PF00076.22	6.3e-34	2	2
MGP_AJ_P0031535	RRM_1	PF00076.22	6.6e-34	1	2
MGP_AJ_P0031535	RRM_1	PF00076.22	6.6e-34	2	2
MGP_AJ_P0031538	RRM_1	PF00076.22	3.9e-22	1	1
MGP_AJ_P0031539	RRM_1	PF00076.22	3.7e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0031540	-	626	-	-	- (aa)	-	-
MGP_AJ_T0031538	-	405	-	MGP_AJ_P0031538	113 (aa)	-	-
MGP_AJ_T0031539	-	665	-	MGP_AJ_P0031539	157 (aa)	-	-
MGP_AJ_T0031536	-	1749	-	-	- (aa)	-	-
MGP_AJ_T0031537	-	2538	-	-	- (aa)	-	-
MGP_AJ_T0031534	-	5875	XM_006534432	MGP_AJ_P0031534	328 (aa)	XP_006534495	Q920Q6
MGP_AJ_T0031535	-	1857	-	MGP_AJ_P0031535	346 (aa)	-	-

Gene Model

Click here to download MGP_AJ_G0018892's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0018892's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0018892	Msi2	50	33.333	MGP_AJ_G0016018	Boll	65	32.857
MGP_AJ_G0018892	Msi2	100	35.398	MGP_AJ_G0029094	Tardbp	79	31.818
MGP_AJ_G0018892	Msi2	99	42.400	MGP_AJ_G0017470	Dazap1	92	49.462
MGP_AJ_G0018892	Msi2	100	52.212	MGP_AJ_G0018238	Hnrnpab	70	48.039
MGP_AJ_G0018892	Msi2	60	33.824	MGP_AJ_G0019946	Slirp	70	33.824
MGP_AJ_G0018892	Msi2	80	34.074	MGP_AJ_G0026919	Rbm38	70	38.095
MGP_AJ_G0018892	Msi2	61	42.857	MGP_AJ_G0033788	-	61	45.205
MGP_AJ_G0018892	Msi2	100	40.870	MGP_AJ_G0025834	-	50	58.333
MGP_AJ_G0018892	Msi2	100	44.348	MGP_AJ_G0030704	Hnrnpa2b1	56	48.193
MGP_AJ_G0018892	Msi2	70	31.250	MGP_AJ_G0028407	Elavl2	72	32.632
MGP_AJ_G0018892	Msi2	61	42.857	MGP_AJ_G0035518	Rbm3	82	43.243
MGP_AJ_G0018892	Msi2	100	90.323	MGP_AJ_G0029933	Msi1	99	75.665
MGP_AJ_G0018892	Msi2	99	41.228	MGP_AJ_G0020581	Hnrnpa0	59	41.989
MGP_AJ_G0018892	Msi2	84	30.208	MGP_AJ_G0028539	Elavl4	78	30.088
MGP_AJ_G0018892	Msi2	61	41.429	MGP_AJ_G0017464	Cirbp	88	43.243
MGP_AJ_G0018892	Msi2	100	53.982	MGP_AJ_G0029746	Hnrnpd	100	72.000
MGP_AJ_G0018892	Msi2	100	54.867	MGP_AJ_G0029748	Hnrnpdl	78	41.634
MGP_AJ_G0018892	Msi2	61	42.857	MGP_AJ_G0035731	Rbmx	88	45.205