EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0019281 (Gene tree)
Gene ID: -
Gene Symbol: Ddx5
Alias: 2600009A06Rik|G17P1|HUMP68|Hlr1|p68
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 5
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Minus strand
Length: 9591 bases
Position: chr11:105412400-105421990
Accession: 105037
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0033059	DEAD	PF00270.29	2.2e-47	1	1
MGP_AJ_P0033065	DEAD	PF00270.29	1.5e-15	1	1
MGP_AJ_P0033066	DEAD	PF00270.29	1.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0033059	-	3123	XM_006532135	MGP_AJ_P0033059	513 (aa)	XP_006532198	B1ARB9
MGP_AJ_T0033066	-	831	-	MGP_AJ_P0033066	167 (aa)	-	-
MGP_AJ_T0033064	-	810	-	-	- (aa)	-	-
MGP_AJ_T0033065	-	861	-	MGP_AJ_P0033065	182 (aa)	-	-
MGP_AJ_T0033062	-	496	-	-	- (aa)	-	-
MGP_AJ_T0033063	-	708	-	-	- (aa)	-	-
MGP_AJ_T0033060	-	3165	-	MGP_AJ_P0033060	406 (aa)	-	-
MGP_AJ_T0033061	-	554	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_AJ_G0019281's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0019281's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0019281	Ddx5	77	31.204	MGP_AJ_G0018830	Ddx52	66	31.204
MGP_AJ_G0019281	Ddx5	93	83.598	MGP_AJ_G0022038	Ddx17	72	82.415
MGP_AJ_G0019281	Ddx5	80	38.922	MGP_AJ_G0020888	Ddx4	57	39.012
MGP_AJ_G0019281	Ddx5	72	33.110	MGP_AJ_G0019446	Eif4a3	82	34.857
MGP_AJ_G0019281	Ddx5	78	32.110	MGP_AJ_G0022640	Eif4a2	92	33.714
MGP_AJ_G0019281	Ddx5	73	30.070	MGP_AJ_G0025510	Ddx31	56	31.313
MGP_AJ_G0019281	Ddx5	81	38.235	MGP_AJ_G0020556	Ddx41	64	39.163
MGP_AJ_G0019281	Ddx5	73	31.148	MGP_AJ_G0034514	Ddx25	73	32.425
MGP_AJ_G0019281	Ddx5	74	31.699	MGP_AJ_G0016395	Ddx18	50	33.134
MGP_AJ_G0019281	Ddx5	71	37.457	MGP_AJ_G0031388	Ddx47	80	37.389
MGP_AJ_G0019281	Ddx5	80	42.522	MGP_AJ_G0035549	Ddx3x	61	43.276
MGP_AJ_G0019281	Ddx5	76	34.062	MGP_AJ_G0033682	Ddx49	97	35.211
MGP_AJ_G0019281	Ddx5	82	42.105	MGP_AJ_G0016900	D1Pas1	61	43.032
MGP_AJ_G0019281	Ddx5	89	45.040	MGP_AJ_G0035049	Ddx43	68	44.519
MGP_AJ_G0019281	Ddx5	67	30.137	MGP_AJ_G0030065	Ddx55	57	30.137
MGP_AJ_G0019281	Ddx5	81	36.389	MGP_AJ_G0022263	Ddx23	50	37.915
MGP_AJ_G0019281	Ddx5	86	32.857	MGP_AJ_G0016524	Ddx59	66	33.094