EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_AJ_G0019438 (Gene tree)
Gene ID
-
Gene Symbol
Rbfox3
Alias
D11Bwg0517e|Fox-3|Hrnbp3|NeuN|Neuna60
Full Name
RNA binding protein%2C fox-1 homolog (C. elegans) 3
Gene Type
protein_coding
Species
Mus_musculus_aj
Status
putative
Strand
Minus strand
Length
427365 bases
Position
chr11:117377110-117804474
Accession
106368
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_AJ_P0033829Fox-1_CPF12414.82.3e-4511
MGP_AJ_P0033832Fox-1_CPF12414.82.3e-4511
MGP_AJ_P0033833Fox-1_CPF12414.82.3e-4511
MGP_AJ_P0033831Fox-1_CPF12414.82.4e-4111
MGP_AJ_P0033830Fox-1_CPF12414.82.5e-4111
MGP_AJ_P0033828Fox-1_CPF12414.82.9e-4111
MGP_AJ_P0033834Fox-1_CPF12414.81.6e-2111
MGP_AJ_P0033835RRM_1PF00076.223.2e-1911
MGP_AJ_P0033829RRM_1PF00076.221.5e-1811
MGP_AJ_P0033832RRM_1PF00076.221.5e-1811
MGP_AJ_P0033833RRM_1PF00076.221.7e-1811
MGP_AJ_P0033828RRM_1PF00076.221.9e-1811
MGP_AJ_P0033830RRM_1PF00076.222.1e-1811
MGP_AJ_P0033834RRM_1PF00076.221.9e-1411
MGP_AJ_P0033831RRM_1PF00076.220.000311
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_AJ_T0033835-900-MGP_AJ_P0033835169 (aa)--
MGP_AJ_T0033834-710-MGP_AJ_P0033834145 (aa)--
MGP_AJ_T0033837-369--- (aa)--
MGP_AJ_T0033836-301--- (aa)--
MGP_AJ_T0033831-1553-MGP_AJ_P0033831329 (aa)--
MGP_AJ_T0033830-3140-MGP_AJ_P0033830374 (aa)--
MGP_AJ_T0033833-2150-MGP_AJ_P0033833327 (aa)--
MGP_AJ_T0033832-1542-MGP_AJ_P0033832313 (aa)--
MGP_AJ_T0033828-3084XM_006533722MGP_AJ_P0033828360 (aa)XP_006533785Q8BIF2
MGP_AJ_T0033829-2809-MGP_AJ_P0033829313 (aa)--
Gene Model
Click here to download MGP_AJ_G0019438's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0019438's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_AJ_G0019438Rbfox39961.932MGP_AJ_G0021979Rbfox29161.972
MGP_AJ_G0019438Rbfox37231.429MGP_AJ_G0016018Boll5043.939
MGP_AJ_G0019438Rbfox35331.868MGP_AJ_G0033065Tial18131.111
MGP_AJ_G0019438Rbfox310071.930MGP_AJ_G0022452Rbfox19165.123

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