EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0019554 (Gene tree)
Gene ID: -
Gene Symbol: Pum2
Alias: 5730503J23Rik|Kiaa0235|Pumm2
Full Name: pumilio RNA-binding family member 2
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Plus strand
Length: 78304 bases
Position: chr12:5581463-5659766
Accession: 1931751
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0034353	PUF	PF00806.19	1.4e-73	1	8
MGP_AJ_P0034353	PUF	PF00806.19	1.4e-73	2	8
MGP_AJ_P0034353	PUF	PF00806.19	1.4e-73	3	8
MGP_AJ_P0034353	PUF	PF00806.19	1.4e-73	4	8
MGP_AJ_P0034353	PUF	PF00806.19	1.4e-73	5	8
MGP_AJ_P0034353	PUF	PF00806.19	1.4e-73	6	8
MGP_AJ_P0034353	PUF	PF00806.19	1.4e-73	7	8
MGP_AJ_P0034353	PUF	PF00806.19	1.4e-73	8	8
MGP_AJ_P0034352	PUF	PF00806.19	1.5e-73	1	8
MGP_AJ_P0034352	PUF	PF00806.19	1.5e-73	2	8
MGP_AJ_P0034352	PUF	PF00806.19	1.5e-73	3	8
MGP_AJ_P0034352	PUF	PF00806.19	1.5e-73	4	8
MGP_AJ_P0034352	PUF	PF00806.19	1.5e-73	5	8
MGP_AJ_P0034352	PUF	PF00806.19	1.5e-73	6	8
MGP_AJ_P0034352	PUF	PF00806.19	1.5e-73	7	8
MGP_AJ_P0034352	PUF	PF00806.19	1.5e-73	8	8
MGP_AJ_P0034358	PUF	PF00806.19	1.5e-73	1	8
MGP_AJ_P0034358	PUF	PF00806.19	1.5e-73	2	8
MGP_AJ_P0034358	PUF	PF00806.19	1.5e-73	3	8
MGP_AJ_P0034358	PUF	PF00806.19	1.5e-73	4	8
MGP_AJ_P0034358	PUF	PF00806.19	1.5e-73	5	8
MGP_AJ_P0034358	PUF	PF00806.19	1.5e-73	6	8
MGP_AJ_P0034358	PUF	PF00806.19	1.5e-73	7	8
MGP_AJ_P0034358	PUF	PF00806.19	1.5e-73	8	8
MGP_AJ_P0034351	PUF	PF00806.19	3.1e-73	1	8
MGP_AJ_P0034351	PUF	PF00806.19	3.1e-73	2	8
MGP_AJ_P0034351	PUF	PF00806.19	3.1e-73	3	8
MGP_AJ_P0034351	PUF	PF00806.19	3.1e-73	4	8
MGP_AJ_P0034351	PUF	PF00806.19	3.1e-73	5	8
MGP_AJ_P0034351	PUF	PF00806.19	3.1e-73	6	8
MGP_AJ_P0034351	PUF	PF00806.19	3.1e-73	7	8
MGP_AJ_P0034351	PUF	PF00806.19	3.1e-73	8	8
MGP_AJ_P0034354	PUF	PF00806.19	3.1e-73	1	8
MGP_AJ_P0034354	PUF	PF00806.19	3.1e-73	2	8
MGP_AJ_P0034354	PUF	PF00806.19	3.1e-73	3	8
MGP_AJ_P0034354	PUF	PF00806.19	3.1e-73	4	8
MGP_AJ_P0034354	PUF	PF00806.19	3.1e-73	5	8
MGP_AJ_P0034354	PUF	PF00806.19	3.1e-73	6	8
MGP_AJ_P0034354	PUF	PF00806.19	3.1e-73	7	8
MGP_AJ_P0034354	PUF	PF00806.19	3.1e-73	8	8
MGP_AJ_P0034357	PUF	PF00806.19	1.4e-72	1	8
MGP_AJ_P0034357	PUF	PF00806.19	1.4e-72	2	8
MGP_AJ_P0034357	PUF	PF00806.19	1.4e-72	3	8
MGP_AJ_P0034357	PUF	PF00806.19	1.4e-72	4	8
MGP_AJ_P0034357	PUF	PF00806.19	1.4e-72	5	8
MGP_AJ_P0034357	PUF	PF00806.19	1.4e-72	6	8
MGP_AJ_P0034357	PUF	PF00806.19	1.4e-72	7	8
MGP_AJ_P0034357	PUF	PF00806.19	1.4e-72	8	8
MGP_AJ_P0034359	PUF	PF00806.19	1.4e-72	1	8
MGP_AJ_P0034359	PUF	PF00806.19	1.4e-72	2	8
MGP_AJ_P0034359	PUF	PF00806.19	1.4e-72	3	8
MGP_AJ_P0034359	PUF	PF00806.19	1.4e-72	4	8
MGP_AJ_P0034359	PUF	PF00806.19	1.4e-72	5	8
MGP_AJ_P0034359	PUF	PF00806.19	1.4e-72	6	8
MGP_AJ_P0034359	PUF	PF00806.19	1.4e-72	7	8
MGP_AJ_P0034359	PUF	PF00806.19	1.4e-72	8	8
MGP_AJ_P0034365	PUF	PF00806.19	4.1e-40	1	4
MGP_AJ_P0034365	PUF	PF00806.19	4.1e-40	2	4
MGP_AJ_P0034365	PUF	PF00806.19	4.1e-40	3	4
MGP_AJ_P0034365	PUF	PF00806.19	4.1e-40	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0034364	-	706	-	MGP_AJ_P0034364	234 (aa)	-	-
MGP_AJ_T0034363	-	994	-	MGP_AJ_P0034363	35 (aa)	-	-
MGP_AJ_T0034360	-	902	-	MGP_AJ_P0034360	262 (aa)	-	-
MGP_AJ_T0034366	-	612	-	-	- (aa)	-	-
MGP_AJ_T0034361	-	648	-	MGP_AJ_P0034361	185 (aa)	-	-
MGP_AJ_T0034359	-	6226	-	MGP_AJ_P0034359	1066 (aa)	-	-
MGP_AJ_T0034358	-	3295	-	MGP_AJ_P0034358	985 (aa)	-	-
MGP_AJ_T0034362	-	472	-	MGP_AJ_P0034362	109 (aa)	-	-
MGP_AJ_T0034351	-	4984	XM_006515277	MGP_AJ_P0034351	1064 (aa)	XP_006515340	Q80U58
MGP_AJ_T0034365	-	665	-	MGP_AJ_P0034365	221 (aa)	-	-
MGP_AJ_T0034353	-	3587	-	MGP_AJ_P0034353	980 (aa)	-	-
MGP_AJ_T0034352	-	5874	-	MGP_AJ_P0034352	985 (aa)	-	-
MGP_AJ_T0034355	-	518	-	-	- (aa)	-	-
MGP_AJ_T0034354	-	6311	-	MGP_AJ_P0034354	1064 (aa)	-	-
MGP_AJ_T0034357	-	3560	-	MGP_AJ_P0034357	1066 (aa)	-	-
MGP_AJ_T0034356	-	6218	-	MGP_AJ_P0034356	35 (aa)	-	-

Gene Model

Click here to download MGP_AJ_G0019554's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0019554's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0019554	Pum2	100	88.835	MGP_AJ_G0028812	Pum1	86	87.294