EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0019571 (Gene tree)
Gene ID: -
Gene Symbol: Ddx1
Alias: AA409185|DBP-RB
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 1
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Minus strand
Length: 27856 bases
Position: chr12:10128277-10156132
Accession: 2144727
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0034398	DEAD	PF00270.29	2.6e-81	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0034398	-	2507	-	MGP_AJ_P0034398	740 (aa)	-	Q91VR5

Gene Model

Click here to download MGP_AJ_G0019571's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0019571's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0019571	Ddx1	60	46.875	MGP_AJ_G0031388	Ddx47	86	46.875
MGP_AJ_G0019571	Ddx1	55	41.071	MGP_AJ_G0018830	Ddx52	60	41.071
MGP_AJ_G0019571	Ddx1	63	40.909	MGP_AJ_G0033682	Ddx49	96	40.909
MGP_AJ_G0019571	Ddx1	53	50.847	MGP_AJ_G0017991	Ddx56	82	50.000
MGP_AJ_G0019571	Ddx1	53	38.710	MGP_AJ_G0034055	Ddx28	67	38.710
MGP_AJ_G0019571	Ddx1	56	40.580	MGP_AJ_G0020556	Ddx41	57	40.580