EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0019853 (Gene tree)
Gene ID: -
Gene Symbol: Srsf5
Alias: Hrs|Sfrs5
Full Name: serine/arginine-rich splicing factor 5
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Plus strand
Length: 6784 bases
Position: chr12:78388823-78395606
Accession: 98287
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0035174	RRM_1	PF00076.22	1.7e-30	1	2
MGP_AJ_P0035174	RRM_1	PF00076.22	1.7e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0035169	-	2700	-	-	- (aa)	-	-
MGP_AJ_T0035168	-	2920	-	-	- (aa)	-	-
MGP_AJ_T0035172	-	547	-	MGP_AJ_P0035172	46 (aa)	-	-
MGP_AJ_T0035173	-	490	-	-	- (aa)	-	-
MGP_AJ_T0035170	-	538	-	-	- (aa)	-	-
MGP_AJ_T0035171	-	886	-	-	- (aa)	-	-
MGP_AJ_T0035174	-	1548	-	MGP_AJ_P0035174	269 (aa)	-	-
MGP_AJ_T0035175	-	3463	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_AJ_G0019853's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0019853's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0019853	Srsf5	89	48.780	MGP_AJ_G0029930	Srsf9	68	39.394
MGP_AJ_G0019853	Srsf5	96	51.020	MGP_AJ_G0018887	Srsf1	80	46.988
MGP_AJ_G0019853	Srsf5	89	63.415	MGP_AJ_G0026779	Srsf6	50	71.642