EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0020581 (Gene tree)
Gene ID: -
Gene Symbol: Hnrnpa0
Alias: 1110055B05Rik|3010025E17Rik|Hnrpa0|hnRNP A0
Full Name: heterogeneous nuclear ribonucleoprotein A0
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Minus strand
Length: 2678 bases
Position: chr13:55608009-55610686
Accession: 1924384
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0037212	RRM_1	PF00076.22	4.1e-31	1	2
MGP_AJ_P0037212	RRM_1	PF00076.22	4.1e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0037212	-	2678	-	MGP_AJ_P0037212	305 (aa)	-	Q9CX86

Gene Model

Click here to download MGP_AJ_G0020581's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0020581's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0020581	Hnrnpa0	59	41.989	MGP_AJ_G0018892	Msi2	99	41.228
MGP_AJ_G0020581	Hnrnpa0	58	35.882	MGP_AJ_G0018238	Hnrnpab	57	35.882
MGP_AJ_G0020581	Hnrnpa0	91	49.640	MGP_AJ_G0030704	Hnrnpa2b1	59	55.307
MGP_AJ_G0020581	Hnrnpa0	56	43.421	MGP_AJ_G0017464	Cirbp	94	38.614
MGP_AJ_G0020581	Hnrnpa0	86	34.173	MGP_AJ_G0029746	Hnrnpd	100	37.838
MGP_AJ_G0020581	Hnrnpa0	73	34.118	MGP_AJ_G0017470	Dazap1	99	34.615
MGP_AJ_G0020581	Hnrnpa0	59	43.646	MGP_AJ_G0029933	Msi1	57	42.949
MGP_AJ_G0020581	Hnrnpa0	56	34.706	MGP_AJ_G0029748	Hnrnpdl	51	34.706
MGP_AJ_G0020581	Hnrnpa0	54	35.065	MGP_AJ_G0035731	Rbmx	82	33.333
MGP_AJ_G0020581	Hnrnpa0	50	31.613	MGP_AJ_G0026800	Pabpc1l	56	30.864