EuRBPDB

Description

Ensembl ID: MGP_AJ_G0020587 (Gene tree)
Gene ID: -
Gene Symbol: Hnrnpk
Alias: Hnrpk|Hnrpk {ECO:0000313|EMBL:AAH89328.1,GN ECO:0000313|MGI:MGI:99894}|KBBP|NOVA|hnRNPK
Full Name: heterogeneous nuclear ribonucleoprotein K
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Minus strand
Length: 13367 bases
Position: chr13:55877050-55890416
Accession: 99894
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0037224	KH_1	PF00013.29	2.4e-43	1	3
MGP_AJ_P0037224	KH_1	PF00013.29	2.4e-43	2	3
MGP_AJ_P0037224	KH_1	PF00013.29	2.4e-43	3	3
MGP_AJ_P0037226	KH_1	PF00013.29	2.4e-43	1	3
MGP_AJ_P0037226	KH_1	PF00013.29	2.4e-43	2	3
MGP_AJ_P0037226	KH_1	PF00013.29	2.4e-43	3	3
MGP_AJ_P0037221	KH_1	PF00013.29	3e-43	1	3
MGP_AJ_P0037221	KH_1	PF00013.29	3e-43	2	3
MGP_AJ_P0037221	KH_1	PF00013.29	3e-43	3	3
MGP_AJ_P0037225	KH_1	PF00013.29	3e-43	1	3
MGP_AJ_P0037225	KH_1	PF00013.29	3e-43	2	3
MGP_AJ_P0037225	KH_1	PF00013.29	3e-43	3	3
MGP_AJ_P0037223	KH_1	PF00013.29	2.3e-33	1	2
MGP_AJ_P0037223	KH_1	PF00013.29	2.3e-33	2	2
MGP_AJ_P0037230	KH_1	PF00013.29	1.1e-23	1	2
MGP_AJ_P0037230	KH_1	PF00013.29	1.1e-23	2	2
MGP_AJ_P0037227	KH_1	PF00013.29	1.6e-23	1	2
MGP_AJ_P0037227	KH_1	PF00013.29	1.6e-23	2	2
MGP_AJ_P0037233	KH_1	PF00013.29	2.9e-23	1	2
MGP_AJ_P0037233	KH_1	PF00013.29	2.9e-23	2	2
MGP_AJ_P0037235	KH_1	PF00013.29	3.3e-09	1	1
MGP_AJ_P0037237	KH_1	PF00013.29	6.6e-09	1	1
MGP_AJ_P0037232	KH_1	PF00013.29	3.4e-05	1	1
MGP_AJ_P0037237	KH_2	PF07650.17	0.00011	1	1
MGP_AJ_P0037232	KH_2	PF07650.17	0.00023	1	1
MGP_AJ_P0037232	ROKNT	PF08067.11	2e-27	1	1
MGP_AJ_P0037227	ROKNT	PF08067.11	3e-27	1	1
MGP_AJ_P0037237	ROKNT	PF08067.11	3.6e-27	1	1
MGP_AJ_P0037224	ROKNT	PF08067.11	7.8e-27	1	1
MGP_AJ_P0037226	ROKNT	PF08067.11	7.8e-27	1	1
MGP_AJ_P0037230	ROKNT	PF08067.11	1.9e-26	1	1
MGP_AJ_P0037221	ROKNT	PF08067.11	4e-26	1	1
MGP_AJ_P0037225	ROKNT	PF08067.11	4e-26	1	1
MGP_AJ_P0037233	ROKNT	PF08067.11	1.9e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0037237	-	1053	-	MGP_AJ_P0037237	97 (aa)	-	-
MGP_AJ_T0037231	-	459	-	-	- (aa)	-	-
MGP_AJ_T0037236	-	775	-	-	- (aa)	-	-
MGP_AJ_T0037230	-	900	-	MGP_AJ_P0037230	256 (aa)	-	-
MGP_AJ_T0037234	-	833	-	-	- (aa)	-	-
MGP_AJ_T0037224	-	2516	-	MGP_AJ_P0037224	440 (aa)	-	-
MGP_AJ_T0037225	-	2626	-	MGP_AJ_P0037225	464 (aa)	-	-
MGP_AJ_T0037226	-	2603	-	MGP_AJ_P0037226	440 (aa)	-	-
MGP_AJ_T0037227	-	1004	-	MGP_AJ_P0037227	299 (aa)	-	-
MGP_AJ_T0037233	-	676	-	MGP_AJ_P0037233	178 (aa)	-	-
MGP_AJ_T0037221	-	2860	XM_006517103	MGP_AJ_P0037221	464 (aa)	XP_006517166	P61979
MGP_AJ_T0037222	-	2350	-	MGP_AJ_P0037222	416 (aa)	-	-
MGP_AJ_T0037223	-	2535	-	MGP_AJ_P0037223	395 (aa)	-	-
MGP_AJ_T0037238	-	780	-	-	- (aa)	-	-
MGP_AJ_T0037228	-	522	-	-	- (aa)	-	-
MGP_AJ_T0037229	-	737	-	-	- (aa)	-	-
MGP_AJ_T0037235	-	476	-	MGP_AJ_P0037235	87 (aa)	-	-
MGP_AJ_T0037232	-	723	-	MGP_AJ_P0037232	77 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0020587	Hnrnpk	67	44.000	MGP_AJ_G0022377	Pcbp2	85	44.000
MGP_AJ_G0020587	Hnrnpk	78	31.724	MGP_AJ_G0030944	Pcbp1	87	42.424
MGP_AJ_G0020587	Hnrnpk	70	51.316	MGP_AJ_G0017367	Pcbp3	81	41.667
MGP_AJ_G0020587	Hnrnpk	57	37.681	MGP_AJ_G0031725	Nova2	54	37.681
MGP_AJ_G0020587	Hnrnpk	57	34.615	MGP_AJ_G0027947	Fubp1	53	34.615
MGP_AJ_G0020587	Hnrnpk	93	98.745	MGP_AJ_G0036244	-	98	98.745
MGP_AJ_G0020587	Hnrnpk	78	32.414	MGP_AJ_G0035211	Pcbp4	86	33.728
MGP_AJ_G0020587	Hnrnpk	56	39.062	MGP_AJ_G0019678	Nova1	56	39.062