EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0020619 (Gene tree)
Gene ID: -
Gene Symbol: Gm5141
Alias: -
Full Name: predicted gene 5141
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Minus strand
Length: 5117 bases
Position: chr13:60435901-60441017
Accession: 3779466
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0037316	zf-C2H2	PF00096.26	2.4e-62	1	12
MGP_AJ_P0037316	zf-C2H2	PF00096.26	2.4e-62	2	12
MGP_AJ_P0037316	zf-C2H2	PF00096.26	2.4e-62	3	12
MGP_AJ_P0037316	zf-C2H2	PF00096.26	2.4e-62	4	12
MGP_AJ_P0037316	zf-C2H2	PF00096.26	2.4e-62	5	12
MGP_AJ_P0037316	zf-C2H2	PF00096.26	2.4e-62	6	12
MGP_AJ_P0037316	zf-C2H2	PF00096.26	2.4e-62	7	12
MGP_AJ_P0037316	zf-C2H2	PF00096.26	2.4e-62	8	12
MGP_AJ_P0037316	zf-C2H2	PF00096.26	2.4e-62	9	12
MGP_AJ_P0037316	zf-C2H2	PF00096.26	2.4e-62	10	12
MGP_AJ_P0037316	zf-C2H2	PF00096.26	2.4e-62	11	12
MGP_AJ_P0037316	zf-C2H2	PF00096.26	2.4e-62	12	12
MGP_AJ_P0037316	zf-met	PF12874.7	3e-06	1	2
MGP_AJ_P0037316	zf-met	PF12874.7	3e-06	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0037316	-	1384	-	MGP_AJ_P0037316	409 (aa)	-	A0A0J9YUW3

Gene Model

Click here to download MGP_AJ_G0020619's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0020619's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0020619	Gm5141	86	42.640	MGP_AJ_G0031542	Zfp628	61	44.624
MGP_AJ_G0020619	Gm5141	99	42.347	MGP_AJ_G0026859	Zfp334	99	42.391
MGP_AJ_G0020619	Gm5141	97	40.566	MGP_AJ_G0030671	Repin1	92	40.566
MGP_AJ_G0020619	Gm5141	86	46.570	MGP_AJ_G0033015	Zfp768	51	46.429
MGP_AJ_G0020619	Gm5141	99	42.857	MGP_AJ_G0033019	E430018J23Rik	86	41.589
MGP_AJ_G0020619	Gm5141	99	51.402	MGP_AJ_G0023196	Zfp51	94	51.282
MGP_AJ_G0020619	Gm5141	99	52.394	MGP_AJ_G0023194	Zfp677	98	54.328
MGP_AJ_G0020619	Gm5141	87	54.046	MGP_AJ_G0031967	Zfp420	99	54.118
MGP_AJ_G0020619	Gm5141	87	45.087	MGP_AJ_G0031904	Zfp974	85	45.428
MGP_AJ_G0020619	Gm5141	84	42.442	MGP_AJ_G0033966	Zfp319	90	42.690
MGP_AJ_G0020619	Gm5141	86	40.094	MGP_AJ_G0026897	Zfp64	69	36.471
MGP_AJ_G0020619	Gm5141	99	47.093	MGP_AJ_G0020654	Zfp759	99	46.765
MGP_AJ_G0020619	Gm5141	100	44.876	MGP_AJ_G0020653	Rslcan18	80	44.876
MGP_AJ_G0020619	Gm5141	86	46.591	MGP_AJ_G0024569	Zfp236	68	48.148
MGP_AJ_G0020619	Gm5141	89	47.093	MGP_AJ_G0029473	Zbtb49	63	45.455
MGP_AJ_G0020619	Gm5141	88	42.105	MGP_AJ_G0029808	Gfi1	100	43.860
MGP_AJ_G0020619	Gm5141	98	48.958	MGP_AJ_G0031802	Zfp94	99	47.619
MGP_AJ_G0020619	Gm5141	85	53.779	MGP_AJ_G0031800	Zfp93	99	53.959
MGP_AJ_G0020619	Gm5141	100	51.271	MGP_AJ_G0031801	Zfp61	62	55.556
MGP_AJ_G0020619	Gm5141	96	52.396	MGP_AJ_G0021971	Zfp251	94	52.396
MGP_AJ_G0020619	Gm5141	85	50.781	MGP_AJ_G0030801	Prdm5	74	50.781
MGP_AJ_G0020619	Gm5141	97	50.578	MGP_AJ_G0032102	Zfp715	77	51.026
MGP_AJ_G0020619	Gm5141	85	39.779	MGP_AJ_G0018319	Zfp672	90	38.750
MGP_AJ_G0020619	Gm5141	86	52.174	MGP_AJ_G0033747	Zfp709	86	52.199
MGP_AJ_G0020619	Gm5141	99	50.515	MGP_AJ_G0020671	Zfp748	99	49.706
MGP_AJ_G0020619	Gm5141	100	50.784	MGP_AJ_G0034459	Zfp872	99	50.152
MGP_AJ_G0020619	Gm5141	86	40.800	MGP_AJ_G0016535	Zbtb41	72	40.517
MGP_AJ_G0020619	Gm5141	99	50.432	MGP_AJ_G0023214	Zfp945	98	51.320
MGP_AJ_G0020619	Gm5141	84	40.714	MGP_AJ_G0018955	Zfp652	50	40.441
MGP_AJ_G0020619	Gm5141	100	51.136	MGP_AJ_G0033748	Zfp882	100	47.181
MGP_AJ_G0020619	Gm5141	85	42.437	MGP_AJ_G0023218	Zscan10	81	38.462
MGP_AJ_G0020619	Gm5141	86	35.762	MGP_AJ_G0031550	Zfp865	81	34.965
MGP_AJ_G0020619	Gm5141	86	52.976	MGP_AJ_G0031795	Zfp112	60	52.976
MGP_AJ_G0020619	Gm5141	95	57.143	MGP_AJ_G0031796	Zfp235	80	57.143
MGP_AJ_G0020619	Gm5141	87	49.841	MGP_AJ_G0031797	Zfp114	61	50.485
MGP_AJ_G0020619	Gm5141	100	49.843	MGP_AJ_G0018368	Zfp867	95	49.206
MGP_AJ_G0020619	Gm5141	92	41.500	MGP_AJ_G0034123	Zfp1	99	41.500
MGP_AJ_G0020619	Gm5141	99	49.194	MGP_AJ_G0026427	Zfp661	95	49.194
MGP_AJ_G0020619	Gm5141	96	55.814	MGP_AJ_G0018223	Zfp454	98	55.686
MGP_AJ_G0020619	Gm5141	96	52.586	MGP_AJ_G0031148	Zfp637	72	50.521
MGP_AJ_G0020619	Gm5141	85	36.034	MGP_AJ_G0031832	Zfp574	71	35.754
MGP_AJ_G0020619	Gm5141	85	43.404	MGP_AJ_G0020235	Zkscan4	53	43.404
MGP_AJ_G0020619	Gm5141	99	56.522	MGP_AJ_G0032098	Zfp141	97	51.341