EuRBPDB

Description

Ensembl ID: MGP_AJ_G0020625 (Gene tree)
Gene ID: -
Gene Symbol: Ercc6l2
Alias: 0610007P08Rik|1700019D06Rik|9330134C04Rik|Rad26l|Sr278
Full Name: excision repair cross-complementing rodent repair deficiency%2C complementation group 6 like 2
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Plus strand
Length: 86293 bases
Position: chr13:61486018-61572310
Accession: 1923501
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0037352	ResIII	PF04851.15	1.5e-11	1	1
MGP_AJ_P0037355	ResIII	PF04851.15	1.9e-11	1	1
MGP_AJ_P0037351	ResIII	PF04851.15	2e-11	1	1
MGP_AJ_P0037349	ResIII	PF04851.15	1.1e-10	1	1
MGP_AJ_P0037354	ResIII	PF04851.15	1.3e-10	1	1
MGP_AJ_P0037348	ResIII	PF04851.15	8.4e-10	1	1
MGP_AJ_P0037352	DEAD	PF00270.29	3.5e-07	1	1
MGP_AJ_P0037354	DEAD	PF00270.29	4.1e-07	1	1
MGP_AJ_P0037355	DEAD	PF00270.29	5.2e-07	1	1
MGP_AJ_P0037351	DEAD	PF00270.29	5.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0037358	-	2579	-	MGP_AJ_P0037358	592 (aa)	-	-
MGP_AJ_T0037349	-	3436	-	MGP_AJ_P0037349	842 (aa)	-	-
MGP_AJ_T0037348	-	1592	-	MGP_AJ_P0037348	467 (aa)	-	Q9JIM3
MGP_AJ_T0037350	-	1820	-	-	- (aa)	-	-
MGP_AJ_T0037351	-	2693	-	MGP_AJ_P0037351	699 (aa)	-	-
MGP_AJ_T0037352	-	1888	-	MGP_AJ_P0037352	582 (aa)	-	-
MGP_AJ_T0037353	-	1961	-	MGP_AJ_P0037353	191 (aa)	-	-
MGP_AJ_T0037354	-	1726	-	MGP_AJ_P0037354	574 (aa)	-	-
MGP_AJ_T0037355	-	2530	-	MGP_AJ_P0037355	684 (aa)	-	-
MGP_AJ_T0037356	-	759	-	MGP_AJ_P0037356	152 (aa)	-	-
MGP_AJ_T0037357	-	975	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0020625	Ercc6l2	82	30.353	MGP_AJ_G0035667	Smarca1	71	30.490
MGP_AJ_G0020625	Ercc6l2	81	30.021	MGP_AJ_G0027603	Chd1l	50	32.657