EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0020888 (Gene tree)
Gene ID: -
Gene Symbol: Ddx4
Alias: AV206478|Mvh|VASA|Vasa|mvh / m'vasa
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 4
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Minus strand
Length: 55448 bases
Position: chr13:110566710-110622157
Accession: 102670
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0038136	DEAD	PF00270.29	4.5e-49	1	1
MGP_AJ_P0038137	DEAD	PF00270.29	4.9e-49	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0038137	-	2848	-	MGP_AJ_P0038137	728 (aa)	-	-
MGP_AJ_T0038136	-	2770	XM_006517524	MGP_AJ_P0038136	702 (aa)	XP_006517587	Q61496

Gene Model

Click here to download MGP_AJ_G0020888's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0020888's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0020888	Ddx4	51	30.971	MGP_AJ_G0034112	Ddx19b	74	30.971
MGP_AJ_G0020888	Ddx4	57	38.519	MGP_AJ_G0020556	Ddx41	64	38.519
MGP_AJ_G0020888	Ddx4	67	50.513	MGP_AJ_G0035549	Ddx3x	69	51.528
MGP_AJ_G0020888	Ddx4	56	40.000	MGP_AJ_G0035049	Ddx43	60	40.000
MGP_AJ_G0020888	Ddx4	56	34.527	MGP_AJ_G0031388	Ddx47	93	34.015
MGP_AJ_G0020888	Ddx4	52	34.474	MGP_AJ_G0033682	Ddx49	95	34.454
MGP_AJ_G0020888	Ddx4	54	30.326	MGP_AJ_G0034514	Ddx25	80	30.488
MGP_AJ_G0020888	Ddx4	57	39.012	MGP_AJ_G0019281	Ddx5	80	38.922
MGP_AJ_G0020888	Ddx4	57	39.163	MGP_AJ_G0022038	Ddx17	61	39.163
MGP_AJ_G0020888	Ddx4	62	52.596	MGP_AJ_G0016900	D1Pas1	71	49.578
MGP_AJ_G0020888	Ddx4	53	39.211	MGP_AJ_G0016524	Ddx59	59	39.211
MGP_AJ_G0020888	Ddx4	57	34.314	MGP_AJ_G0018830	Ddx52	66	34.314
MGP_AJ_G0020888	Ddx4	56	30.691	MGP_AJ_G0019446	Eif4a3	90	30.691