EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_AJ_G0022050 (Gene tree)
Gene ID
-
Gene Symbol
Apobec3
Alias
APOBEC3|Apobec|Arp3|BC003314|CEM15|Cem15|Gm20117|Rfv-3|Rfv3
Full Name
apolipoprotein B mRNA editing enzyme%2C catalytic polypeptide 3
Gene Type
protein_coding
Species
Mus_musculus_aj
Status
putative
Strand
Plus strand
Length
26805 bases
Position
chr15:77417955-77444759
Accession
1933111
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_AJ_P0041729APOBEC_NPF08210.112.6e-7912
MGP_AJ_P0041729APOBEC_NPF08210.112.6e-7922
MGP_AJ_P0041726APOBEC_NPF08210.113.3e-7912
MGP_AJ_P0041726APOBEC_NPF08210.113.3e-7922
MGP_AJ_P0041730APOBEC_NPF08210.113.3e-7912
MGP_AJ_P0041730APOBEC_NPF08210.113.3e-7922
MGP_AJ_P0041732APOBEC_NPF08210.113.7e-7912
MGP_AJ_P0041732APOBEC_NPF08210.113.7e-7922
MGP_AJ_P0041724APOBEC_NPF08210.112.6e-2611
MGP_AJ_P0041723APOBEC_NPF08210.117.7e-2611
MGP_AJ_P0041733APOBEC_NPF08210.118.7e-2411
MGP_AJ_P0041729APOBEC_CPF05240.147.7e-5412
MGP_AJ_P0041729APOBEC_CPF05240.147.7e-5422
MGP_AJ_P0041726APOBEC_CPF05240.141.2e-5312
MGP_AJ_P0041726APOBEC_CPF05240.141.2e-5322
MGP_AJ_P0041730APOBEC_CPF05240.141.3e-5312
MGP_AJ_P0041730APOBEC_CPF05240.141.3e-5322
MGP_AJ_P0041732APOBEC_CPF05240.141.5e-5312
MGP_AJ_P0041732APOBEC_CPF05240.141.5e-5322
MGP_AJ_P0041723APOBEC_CPF05240.144.4e-2811
MGP_AJ_P0041724APOBEC_CPF05240.145.2e-2811
MGP_AJ_P0041733APOBEC_CPF05240.141.7e-2411
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_AJ_T0041728-1217-MGP_AJ_P004172846 (aa)--
MGP_AJ_T0041729-1980-MGP_AJ_P0041729407 (aa)--
MGP_AJ_T0041730-2780-MGP_AJ_P0041730430 (aa)--
MGP_AJ_T0041733-648-MGP_AJ_P004173385 (aa)--
MGP_AJ_T0041732-1323-MGP_AJ_P0041732440 (aa)--
MGP_AJ_T0041731-2246-MGP_AJ_P0041731392 (aa)--
MGP_AJ_T0041723-750XM_006521551MGP_AJ_P0041723166 (aa)XP_006521614Q99J72
MGP_AJ_T0041724-817-MGP_AJ_P0041724151 (aa)--
MGP_AJ_T0041725-607--- (aa)--
MGP_AJ_T0041726-2460-MGP_AJ_P0041726429 (aa)--
MGP_AJ_T0041727-699-MGP_AJ_P004172779 (aa)--
MGP_AJ_T0041735-2082--- (aa)--
MGP_AJ_T0041736-720--- (aa)--
MGP_AJ_T0041734-731--- (aa)--
Gene Model
Click here to download MGP_AJ_G0022050's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0022050's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_AJ_G0022050Apobec38438.028MGP_AJ_G0031198Apobec17434.737
MGP_AJ_G0022050Apobec39642.169MGP_AJ_G0031197Aicda9139.344
MGP_AJ_G0022050Apobec39833.721MGP_AJ_G0023833Apobec27833.333

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