EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0022263 (Gene tree)
Gene ID: -
Gene Symbol: Ddx23
Alias: 3110082M05Rik|4921506D17Rik
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 23
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Minus strand
Length: 17729 bases
Position: chr15:96428591-96446319
Accession: 1921601
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0042431	DEAD	PF00270.29	2.3e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0042431	-	3167	XM_006521493	MGP_AJ_P0042431	819 (aa)	XP_006521556	D3Z0M9
MGP_AJ_T0042433	-	3403	-	-	- (aa)	-	-
MGP_AJ_T0042432	-	3085	-	-	- (aa)	-	-
MGP_AJ_T0042435	-	321	-	MGP_AJ_P0042435	80 (aa)	-	-
MGP_AJ_T0042434	-	786	-	-	- (aa)	-	-
MGP_AJ_T0042436	-	610	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_AJ_G0022263's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0022263's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0022263	Ddx23	53	38.063	MGP_AJ_G0016900	D1Pas1	63	38.063
MGP_AJ_G0022263	Ddx23	54	30.243	MGP_AJ_G0018830	Ddx52	70	30.222
MGP_AJ_G0022263	Ddx23	50	37.915	MGP_AJ_G0019281	Ddx5	81	36.389
MGP_AJ_G0022263	Ddx23	54	40.757	MGP_AJ_G0035049	Ddx43	63	40.757
MGP_AJ_G0022263	Ddx23	51	39.110	MGP_AJ_G0022038	Ddx17	60	39.110
MGP_AJ_G0022263	Ddx23	52	37.868	MGP_AJ_G0035549	Ddx3x	63	37.753
MGP_AJ_G0022263	Ddx23	52	35.417	MGP_AJ_G0016524	Ddx59	64	35.417
MGP_AJ_G0022263	Ddx23	52	40.139	MGP_AJ_G0020556	Ddx41	75	37.400