EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0022377 (Gene tree)
Gene ID: -
Gene Symbol: Pcbp2
Alias: AW412548|Cbp|Hnrnpx|Hnrpx|alphaCP-2
Full Name: poly(rC) binding protein 2
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Plus strand
Length: 31537 bases
Position: chr15:100533060-100564596
Accession: 108202
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0042746	KH_1	PF00013.29	1.6e-49	1	3
MGP_AJ_P0042746	KH_1	PF00013.29	1.6e-49	2	3
MGP_AJ_P0042746	KH_1	PF00013.29	1.6e-49	3	3
MGP_AJ_P0042748	KH_1	PF00013.29	2e-49	1	3
MGP_AJ_P0042748	KH_1	PF00013.29	2e-49	2	3
MGP_AJ_P0042748	KH_1	PF00013.29	2e-49	3	3
MGP_AJ_P0042747	KH_1	PF00013.29	2.4e-49	1	3
MGP_AJ_P0042747	KH_1	PF00013.29	2.4e-49	2	3
MGP_AJ_P0042747	KH_1	PF00013.29	2.4e-49	3	3
MGP_AJ_P0042746	KH_2	PF07650.17	2e-14	1	1
MGP_AJ_P0042748	KH_2	PF07650.17	2.5e-14	1	1
MGP_AJ_P0042747	KH_2	PF07650.17	3.1e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0042748	-	2780	-	MGP_AJ_P0042748	349 (aa)	-	-
MGP_AJ_T0042747	-	2819	-	MGP_AJ_P0042747	362 (aa)	-	-
MGP_AJ_T0042746	-	2726	XM_006520582	MGP_AJ_P0042746	331 (aa)	XP_006520645	Q61990

Gene Model

Click here to download MGP_AJ_G0022377's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0022377's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0022377	Pcbp2	54	30.303	MGP_AJ_G0036244	-	81	30.303
MGP_AJ_G0022377	Pcbp2	69	39.726	MGP_AJ_G0019678	Nova1	53	39.726
MGP_AJ_G0022377	Pcbp2	100	81.744	MGP_AJ_G0030944	Pcbp1	100	81.744
MGP_AJ_G0022377	Pcbp2	85	44.000	MGP_AJ_G0020587	Hnrnpk	67	44.000
MGP_AJ_G0022377	Pcbp2	68	33.333	MGP_AJ_G0023907	Khsrp	51	33.333
MGP_AJ_G0022377	Pcbp2	97	59.877	MGP_AJ_G0035211	Pcbp4	98	66.321
MGP_AJ_G0022377	Pcbp2	99	78.338	MGP_AJ_G0017367	Pcbp3	99	82.143
MGP_AJ_G0022377	Pcbp2	95	35.556	MGP_AJ_G0022628	Igf2bp2	62	35.556
MGP_AJ_G0022377	Pcbp2	68	41.096	MGP_AJ_G0031725	Nova2	50	41.096