EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0022421 (Gene tree)
Gene ID: -
Gene Symbol: Dnase1
Alias: AI788650|DNaseI|Dnl1
Full Name: deoxyribonuclease I
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Plus strand
Length: 3083 bases
Position: chr16:364496-367578
Accession: 103157
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0042897	Exo_endo_phos	PF03372.23	2.1e-07	1	1
MGP_AJ_P0042899	Exo_endo_phos	PF03372.23	2.1e-07	1	1
MGP_AJ_P0042896	Exo_endo_phos	PF03372.23	1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0042899	-	1286	-	MGP_AJ_P0042899	284 (aa)	-	-
MGP_AJ_T0042898	-	598	-	MGP_AJ_P0042898	71 (aa)	-	-
MGP_AJ_T0042901	-	1311	-	-	- (aa)	-	-
MGP_AJ_T0042900	-	2782	-	-	- (aa)	-	-
MGP_AJ_T0042903	-	726	-	-	- (aa)	-	-
MGP_AJ_T0042902	-	917	-	MGP_AJ_P0042902	203 (aa)	-	-
MGP_AJ_T0042897	-	1480	-	MGP_AJ_P0042897	284 (aa)	-	-
MGP_AJ_T0042896	-	988	XM_006521774	MGP_AJ_P0042896	225 (aa)	XP_006521837	P49183
MGP_AJ_T0042904	-	844	-	-	- (aa)	-	-
MGP_AJ_T0042905	-	405	-	-	- (aa)	-	-
MGP_AJ_T0042906	-	368	-	MGP_AJ_P0042906	63 (aa)	-	-

Gene Model

Click here to download MGP_AJ_G0022421's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0022421's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0022421	Dnase1	96	52.995	MGP_AJ_G0023259	Dnase1l2	100	55.135
MGP_AJ_G0022421	Dnase1	97	47.312	MGP_AJ_G0020933	Dnase1l3	85	49.049
MGP_AJ_G0022421	Dnase1	99	40.141	MGP_AJ_G0035818	Dnase1l1	80	42.146