EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0022900 (Gene tree)
Gene ID: -
Gene Symbol: Arl6
Alias: 1110018H24Rik|2210411E14Rik|ARL6|BBS3|Bbs3
Full Name: ADP-ribosylation factor-like 6
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Minus strand
Length: 26948 bases
Position: chr16:56411114-56438061
Accession: 1927136
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0044796	MMR_HSR1	PF01926.23	2.9e-06	1	1
MGP_AJ_P0044797	MMR_HSR1	PF01926.23	3.2e-06	1	1
MGP_AJ_P0044798	MMR_HSR1	PF01926.23	3.2e-06	1	1
MGP_AJ_P0044799	MMR_HSR1	PF01926.23	1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0044796	-	1695	XM_006522398	MGP_AJ_P0044796	186 (aa)	XP_006522461	O88848
MGP_AJ_T0044797	-	1553	-	MGP_AJ_P0044797	193 (aa)	-	-
MGP_AJ_T0044798	-	874	-	MGP_AJ_P0044798	193 (aa)	-	-
MGP_AJ_T0044799	-	810	-	MGP_AJ_P0044799	194 (aa)	-	-

Gene Model

Click here to download MGP_AJ_G0022900's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0022900's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0022900	Arl6	88	34.146	MGP_AJ_G0021398	Arl11	91	34.146
MGP_AJ_G0022900	Arl6	92	35.870	MGP_AJ_G0016269	Arl4c	94	35.870
MGP_AJ_G0022900	Arl6	98	38.043	MGP_AJ_G0019014	Arl5c	99	38.043
MGP_AJ_G0022900	Arl6	54	37.143	MGP_AJ_G0018245	Sar1b	52	37.143
MGP_AJ_G0022900	Arl6	99	30.851	MGP_AJ_G0027256	Arl14	94	30.851
MGP_AJ_G0022900	Arl6	97	37.433	MGP_AJ_G0019665	Arl4a	92	37.433
MGP_AJ_G0022900	Arl6	99	36.216	MGP_AJ_G0025187	Arl3	99	36.216
MGP_AJ_G0022900	Arl6	89	39.157	MGP_AJ_G0025344	Arl5b	92	39.506
MGP_AJ_G0022900	Arl6	96	41.341	MGP_AJ_G0022267	Arf3	96	41.341
MGP_AJ_G0022900	Arl6	85	32.075	MGP_AJ_G0016500	Arl8a	82	32.075
MGP_AJ_G0022900	Arl6	91	37.647	MGP_AJ_G0025710	Arl5a	93	37.647
MGP_AJ_G0022900	Arl6	98	35.519	MGP_AJ_G0024717	Arl2	97	35.519
MGP_AJ_G0022900	Arl6	91	36.471	MGP_AJ_G0017610	Arl1	94	35.593
MGP_AJ_G0022900	Arl6	96	41.341	MGP_AJ_G0018362	Arf1	96	41.341
MGP_AJ_G0022900	Arl6	61	31.579	MGP_AJ_G0020525	Arl10	53	31.579
MGP_AJ_G0022900	Arl6	89	31.792	MGP_AJ_G0019178	Arl4d	84	31.792
MGP_AJ_G0022900	Arl6	92	40.936	MGP_AJ_G0019239	Arf2	92	40.936
MGP_AJ_G0022900	Arl6	92	30.387	MGP_AJ_G0026986	Arfrp1	93	33.929
MGP_AJ_G0022900	Arl6	85	32.704	MGP_AJ_G0031071	Arl8b	82	32.704