EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0023218 (Gene tree)
Gene ID: -
Gene Symbol: Zscan10
Alias: BC068284|Zfp206|Zkscan10|Znf206|Zscan10
Full Name: zinc finger and SCAN domain containing 10
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Plus strand
Length: 10119 bases
Position: chr17:21862500-21872618
Accession: 3040700
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0045778	zf-C2H2	PF00096.26	4.5e-68	1	12
MGP_AJ_P0045778	zf-C2H2	PF00096.26	4.5e-68	2	12
MGP_AJ_P0045778	zf-C2H2	PF00096.26	4.5e-68	3	12
MGP_AJ_P0045778	zf-C2H2	PF00096.26	4.5e-68	4	12
MGP_AJ_P0045778	zf-C2H2	PF00096.26	4.5e-68	5	12
MGP_AJ_P0045778	zf-C2H2	PF00096.26	4.5e-68	6	12
MGP_AJ_P0045778	zf-C2H2	PF00096.26	4.5e-68	7	12
MGP_AJ_P0045778	zf-C2H2	PF00096.26	4.5e-68	8	12
MGP_AJ_P0045778	zf-C2H2	PF00096.26	4.5e-68	9	12
MGP_AJ_P0045778	zf-C2H2	PF00096.26	4.5e-68	10	12
MGP_AJ_P0045778	zf-C2H2	PF00096.26	4.5e-68	11	12
MGP_AJ_P0045778	zf-C2H2	PF00096.26	4.5e-68	12	12
MGP_AJ_P0045780	zf-C2H2	PF00096.26	5.1e-67	1	12
MGP_AJ_P0045780	zf-C2H2	PF00096.26	5.1e-67	2	12
MGP_AJ_P0045780	zf-C2H2	PF00096.26	5.1e-67	3	12
MGP_AJ_P0045780	zf-C2H2	PF00096.26	5.1e-67	4	12
MGP_AJ_P0045780	zf-C2H2	PF00096.26	5.1e-67	5	12
MGP_AJ_P0045780	zf-C2H2	PF00096.26	5.1e-67	6	12
MGP_AJ_P0045780	zf-C2H2	PF00096.26	5.1e-67	7	12
MGP_AJ_P0045780	zf-C2H2	PF00096.26	5.1e-67	8	12
MGP_AJ_P0045780	zf-C2H2	PF00096.26	5.1e-67	9	12
MGP_AJ_P0045780	zf-C2H2	PF00096.26	5.1e-67	10	12
MGP_AJ_P0045780	zf-C2H2	PF00096.26	5.1e-67	11	12
MGP_AJ_P0045780	zf-C2H2	PF00096.26	5.1e-67	12	12
MGP_AJ_P0045782	zf-C2H2	PF00096.26	4.9e-66	1	12
MGP_AJ_P0045782	zf-C2H2	PF00096.26	4.9e-66	2	12
MGP_AJ_P0045782	zf-C2H2	PF00096.26	4.9e-66	3	12
MGP_AJ_P0045782	zf-C2H2	PF00096.26	4.9e-66	4	12
MGP_AJ_P0045782	zf-C2H2	PF00096.26	4.9e-66	5	12
MGP_AJ_P0045782	zf-C2H2	PF00096.26	4.9e-66	6	12
MGP_AJ_P0045782	zf-C2H2	PF00096.26	4.9e-66	7	12
MGP_AJ_P0045782	zf-C2H2	PF00096.26	4.9e-66	8	12
MGP_AJ_P0045782	zf-C2H2	PF00096.26	4.9e-66	9	12
MGP_AJ_P0045782	zf-C2H2	PF00096.26	4.9e-66	10	12
MGP_AJ_P0045782	zf-C2H2	PF00096.26	4.9e-66	11	12
MGP_AJ_P0045782	zf-C2H2	PF00096.26	4.9e-66	12	12
MGP_AJ_P0045781	zf-C2H2	PF00096.26	2e-64	1	12
MGP_AJ_P0045781	zf-C2H2	PF00096.26	2e-64	2	12
MGP_AJ_P0045781	zf-C2H2	PF00096.26	2e-64	3	12
MGP_AJ_P0045781	zf-C2H2	PF00096.26	2e-64	4	12
MGP_AJ_P0045781	zf-C2H2	PF00096.26	2e-64	5	12
MGP_AJ_P0045781	zf-C2H2	PF00096.26	2e-64	6	12
MGP_AJ_P0045781	zf-C2H2	PF00096.26	2e-64	7	12
MGP_AJ_P0045781	zf-C2H2	PF00096.26	2e-64	8	12
MGP_AJ_P0045781	zf-C2H2	PF00096.26	2e-64	9	12
MGP_AJ_P0045781	zf-C2H2	PF00096.26	2e-64	10	12
MGP_AJ_P0045781	zf-C2H2	PF00096.26	2e-64	11	12
MGP_AJ_P0045781	zf-C2H2	PF00096.26	2e-64	12	12
MGP_AJ_P0045779	zf-C2H2	PF00096.26	5.4e-64	1	12
MGP_AJ_P0045779	zf-C2H2	PF00096.26	5.4e-64	2	12
MGP_AJ_P0045779	zf-C2H2	PF00096.26	5.4e-64	3	12
MGP_AJ_P0045779	zf-C2H2	PF00096.26	5.4e-64	4	12
MGP_AJ_P0045779	zf-C2H2	PF00096.26	5.4e-64	5	12
MGP_AJ_P0045779	zf-C2H2	PF00096.26	5.4e-64	6	12
MGP_AJ_P0045779	zf-C2H2	PF00096.26	5.4e-64	7	12
MGP_AJ_P0045779	zf-C2H2	PF00096.26	5.4e-64	8	12
MGP_AJ_P0045779	zf-C2H2	PF00096.26	5.4e-64	9	12
MGP_AJ_P0045779	zf-C2H2	PF00096.26	5.4e-64	10	12
MGP_AJ_P0045779	zf-C2H2	PF00096.26	5.4e-64	11	12
MGP_AJ_P0045779	zf-C2H2	PF00096.26	5.4e-64	12	12
MGP_AJ_P0045783	zf-C2H2	PF00096.26	1.6e-08	1	2
MGP_AJ_P0045783	zf-C2H2	PF00096.26	1.6e-08	2	2
MGP_AJ_P0045782	zf-met	PF12874.7	3.8e-07	1	1
MGP_AJ_P0045781	zf-met	PF12874.7	1.1e-05	1	1
MGP_AJ_P0045779	zf-met	PF12874.7	2.2e-05	1	1
MGP_AJ_P0045778	zf-met	PF12874.7	0.00015	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0045785	-	891	-	MGP_AJ_P0045785	149 (aa)	-	-
MGP_AJ_T0045784	-	531	-	-	- (aa)	-	-
MGP_AJ_T0045788	-	844	-	MGP_AJ_P0045788	262 (aa)	-	-
MGP_AJ_T0045789	-	548	-	-	- (aa)	-	-
MGP_AJ_T0045786	-	909	-	MGP_AJ_P0045786	190 (aa)	-	-
MGP_AJ_T0045787	-	1006	-	MGP_AJ_P0045787	190 (aa)	-	-
MGP_AJ_T0045779	-	2609	-	MGP_AJ_P0045779	750 (aa)	-	-
MGP_AJ_T0045778	-	2368	XM_011246504	MGP_AJ_P0045778	672 (aa)	XP_011244806	Q3URR7
MGP_AJ_T0045782	-	1902	-	MGP_AJ_P0045782	543 (aa)	-	-
MGP_AJ_T0045783	-	1074	-	MGP_AJ_P0045783	329 (aa)	-	-
MGP_AJ_T0045780	-	2698	-	MGP_AJ_P0045780	782 (aa)	-	-
MGP_AJ_T0045781	-	2271	-	MGP_AJ_P0045781	702 (aa)	-	-

Gene Model

Click here to download MGP_AJ_G0023218's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0023218's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0023218	Zscan10	98	45.525	MGP_AJ_G0020653	Rslcan18	84	45.525
MGP_AJ_G0023218	Zscan10	87	33.081	MGP_AJ_G0020654	Zfp759	92	35.036
MGP_AJ_G0023218	Zscan10	88	32.440	MGP_AJ_G0030801	Prdm5	90	35.235
MGP_AJ_G0023218	Zscan10	98	43.564	MGP_AJ_G0020235	Zkscan4	95	49.664
MGP_AJ_G0023218	Zscan10	78	36.824	MGP_AJ_G0033747	Zfp709	87	36.789
MGP_AJ_G0023218	Zscan10	78	43.254	MGP_AJ_G0033019	E430018J23Rik	66	43.254
MGP_AJ_G0023218	Zscan10	76	41.339	MGP_AJ_G0026859	Zfp334	69	39.731
MGP_AJ_G0023218	Zscan10	74	37.631	MGP_AJ_G0018319	Zfp672	100	42.857
MGP_AJ_G0023218	Zscan10	75	44.554	MGP_AJ_G0018223	Zfp454	70	41.854
MGP_AJ_G0023218	Zscan10	86	31.579	MGP_AJ_G0031550	Zfp865	82	31.579
MGP_AJ_G0023218	Zscan10	74	41.818	MGP_AJ_G0031551	-	73	30.796
MGP_AJ_G0023218	Zscan10	76	37.107	MGP_AJ_G0026897	Zfp64	83	33.913
MGP_AJ_G0023218	Zscan10	76	46.199	MGP_AJ_G0031542	Zfp628	63	46.199
MGP_AJ_G0023218	Zscan10	77	37.696	MGP_AJ_G0018955	Zfp652	61	37.696
MGP_AJ_G0023218	Zscan10	86	35.238	MGP_AJ_G0031904	Zfp974	88	35.238
MGP_AJ_G0023218	Zscan10	76	45.914	MGP_AJ_G0033015	Zfp768	51	44.944
MGP_AJ_G0023218	Zscan10	77	42.771	MGP_AJ_G0029808	Gfi1	100	42.857
MGP_AJ_G0023218	Zscan10	78	48.837	MGP_AJ_G0031797	Zfp114	65	48.837
MGP_AJ_G0023218	Zscan10	81	38.462	MGP_AJ_G0020619	Gm5141	85	42.437
MGP_AJ_G0023218	Zscan10	83	50.862	MGP_AJ_G0031148	Zfp637	82	50.442
MGP_AJ_G0023218	Zscan10	78	37.010	MGP_AJ_G0020671	Zfp748	92	37.010
MGP_AJ_G0023218	Zscan10	77	40.456	MGP_AJ_G0031802	Zfp94	70	44.402
MGP_AJ_G0023218	Zscan10	78	42.972	MGP_AJ_G0031800	Zfp93	99	42.857
MGP_AJ_G0023218	Zscan10	78	47.126	MGP_AJ_G0031801	Zfp61	56	46.983
MGP_AJ_G0023218	Zscan10	79	34.332	MGP_AJ_G0033748	Zfp882	85	35.160
MGP_AJ_G0023218	Zscan10	78	47.953	MGP_AJ_G0029473	Zbtb49	62	50.704
MGP_AJ_G0023218	Zscan10	75	47.667	MGP_AJ_G0021971	Zfp251	67	47.667
MGP_AJ_G0023218	Zscan10	80	39.935	MGP_AJ_G0034459	Zfp872	97	39.935
MGP_AJ_G0023218	Zscan10	79	37.143	MGP_AJ_G0024569	Zfp236	73	37.143
MGP_AJ_G0023218	Zscan10	83	46.053	MGP_AJ_G0034123	Zfp1	79	46.460
MGP_AJ_G0023218	Zscan10	78	40.179	MGP_AJ_G0031967	Zfp420	97	41.080
MGP_AJ_G0023218	Zscan10	78	36.820	MGP_AJ_G0032102	Zfp715	64	36.820
MGP_AJ_G0023218	Zscan10	77	37.065	MGP_AJ_G0023214	Zfp945	84	37.065
MGP_AJ_G0023218	Zscan10	79	47.436	MGP_AJ_G0031796	Zfp235	61	47.436
MGP_AJ_G0023218	Zscan10	77	40.146	MGP_AJ_G0031795	Zfp112	56	44.978
MGP_AJ_G0023218	Zscan10	75	35.128	MGP_AJ_G0033966	Zfp319	93	34.081
MGP_AJ_G0023218	Zscan10	78	43.165	MGP_AJ_G0029008	Zbtb17	72	34.627
MGP_AJ_G0023218	Zscan10	81	46.667	MGP_AJ_G0032098	Zfp141	63	46.667
MGP_AJ_G0023218	Zscan10	76	32.797	MGP_AJ_G0016535	Zbtb41	54	32.797
MGP_AJ_G0023218	Zscan10	83	37.160	MGP_AJ_G0018368	Zfp867	83	37.160
MGP_AJ_G0023218	Zscan10	81	41.509	MGP_AJ_G0026427	Zfp661	93	44.628
MGP_AJ_G0023218	Zscan10	85	36.705	MGP_AJ_G0030671	Repin1	92	36.705
MGP_AJ_G0023218	Zscan10	86	32.915	MGP_AJ_G0031832	Zfp574	93	33.902
MGP_AJ_G0023218	Zscan10	78	38.060	MGP_AJ_G0023196	Zfp51	88	42.194
MGP_AJ_G0023218	Zscan10	75	37.965	MGP_AJ_G0023194	Zfp677	90	37.965