EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0023553 (Gene tree)
Gene ID: -
Gene Symbol: Skiv2l
Alias: 4930534J06Rik|AW214248|Ddx13|SKI|Ski2w
Full Name: superkiller viralicidic activity 2-like (S. cerevisiae)
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Minus strand
Length: 10912 bases
Position: chr17:33809484-33820395
Accession: 1099835
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0047198	rRNA_proc-arch	PF13234.6	1.2e-41	1	1
MGP_AJ_P0047202	rRNA_proc-arch	PF13234.6	1e-17	1	2
MGP_AJ_P0047202	rRNA_proc-arch	PF13234.6	1e-17	2	2
MGP_AJ_P0047198	DEAD	PF00270.29	1.6e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0047197	-	4123	-	-	- (aa)	-	-
MGP_AJ_T0047199	-	3999	-	-	- (aa)	-	-
MGP_AJ_T0047198	-	3955	-	MGP_AJ_P0047198	1244 (aa)	-	-
MGP_AJ_T0047207	-	881	-	MGP_AJ_P0047207	92 (aa)	-	-
MGP_AJ_T0047206	-	458	-	-	- (aa)	-	-
MGP_AJ_T0047201	-	462	-	-	- (aa)	-	-
MGP_AJ_T0047200	-	4520	-	-	- (aa)	-	-
MGP_AJ_T0047203	-	817	-	-	- (aa)	-	-
MGP_AJ_T0047202	-	727	-	MGP_AJ_P0047202	242 (aa)	-	-
MGP_AJ_T0047205	-	832	-	-	- (aa)	-	-
MGP_AJ_T0047204	-	927	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_AJ_G0023553's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0023553's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0023553	Skiv2l	76	37.279	MGP_AJ_G0020891	Skiv2l2	88	37.279