EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0023613 (Gene tree)
Gene ID: -
Gene Symbol: Dhx16
Alias: 2410006N22Rik|DBP2|Ddx16|mKIAA0577
Full Name: DEAH (Asp-Glu-Ala-His) box polypeptide 16
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Plus strand
Length: 14047 bases
Position: chr17:34960807-34974853
Accession: 1916442
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0047486	DEAD	PF00270.29	7.8e-07	1	1
MGP_AJ_P0047486	HA2	PF04408.23	7.2e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0047490	-	562	-	-	- (aa)	-	-
MGP_AJ_T0047491	-	462	-	-	- (aa)	-	-
MGP_AJ_T0047492	-	490	-	MGP_AJ_P0047492	122 (aa)	-	-
MGP_AJ_T0047493	-	491	-	-	- (aa)	-	-
MGP_AJ_T0047487	-	3275	-	MGP_AJ_P0047487	741 (aa)	-	-
MGP_AJ_T0047486	-	3351	XM_006524873	MGP_AJ_P0047486	1044 (aa)	XP_006524936	G3UXT5
MGP_AJ_T0047489	-	566	-	-	- (aa)	-	-
MGP_AJ_T0047488	-	722	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_AJ_G0023613's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0023613's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0023613	Dhx16	62	47.813	MGP_AJ_G0026767	Dhx35	94	47.813
MGP_AJ_G0023613	Dhx16	59	32.457	MGP_AJ_G0033107	Dhx32	86	32.457
MGP_AJ_G0023613	Dhx16	67	49.714	MGP_AJ_G0034086	Dhx38	57	48.957
MGP_AJ_G0023613	Dhx16	61	52.550	MGP_AJ_G0029511	Dhx15	81	53.860
MGP_AJ_G0023613	Dhx16	61	46.472	MGP_AJ_G0018589	Dhx33	93	46.472
MGP_AJ_G0023613	Dhx16	60	58.954	MGP_AJ_G0019179	Dhx8	54	58.954
MGP_AJ_G0023613	Dhx16	60	42.510	MGP_AJ_G0030077	Dhx37	60	42.510
MGP_AJ_G0023613	Dhx16	61	42.012	MGP_AJ_G0018862	Dhx40	99	37.004
MGP_AJ_G0023613	Dhx16	56	42.564	MGP_AJ_G0027219	Dhx36	62	42.564