EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_AJ_G0023887 (Gene tree)
Gene ID
-
Gene Symbol
Safb
Alias
3110021E02Rik|5330423C17Rik|AU018122|D18386|E130307D12|HAP|HET|SAF-B1|SAFB1|Safb1
Full Name
scaffold attachment factor B
Gene Type
protein_coding
Species
Mus_musculus_aj
Status
putative
Strand
Plus strand
Length
21737 bases
Position
chr17:56695581-56717317
Accession
2146974
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_AJ_P0048281RRM_5PF13893.65.3e-0611
MGP_AJ_P0048279RRM_5PF13893.65.3e-0611
MGP_AJ_P0048281RRM_1PF00076.222.5e-1211
MGP_AJ_P0048279RRM_1PF00076.222.5e-1211
MGP_AJ_P0048281SAPPF02037.271.4e-1011
MGP_AJ_P0048279SAPPF02037.271.4e-1011
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_AJ_T0048279-2894-MGP_AJ_P0048279863 (aa)--
MGP_AJ_T0048278-1755--- (aa)--
MGP_AJ_T0048280-342-MGP_AJ_P004828044 (aa)--
MGP_AJ_T0048281-2879-MGP_AJ_P0048281861 (aa)--
MGP_AJ_T0048282-774-MGP_AJ_P0048282168 (aa)--
MGP_AJ_T0048283-1998--- (aa)--
MGP_AJ_T0048284-3158--- (aa)--
MGP_AJ_T0048285-714--- (aa)--
MGP_AJ_T0048286-703--- (aa)--
MGP_AJ_T0048287-420--- (aa)--
MGP_AJ_T0048288-1073--- (aa)--
MGP_AJ_T0048289-423--- (aa)--
Gene Model
Click here to download MGP_AJ_G0023887's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0023887's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_AJ_G0023887Safb10060.714MGP_AJ_G0023886Safb28950.625

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