EuRBPDB

Description

Ensembl ID: MGP_AJ_G0024246 (Gene tree)
Gene ID: -
Gene Symbol: Ankhd1
Alias: 1110004O12Rik|4933432B13Rik|9130019P20Rik|A530027J04Rik|A630021B20Rik|AA571404|Mask|mFLJ00246|mKIAA1085
Full Name: ankyrin repeat and KH domain containing 1
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Plus strand
Length: 106814 bases
Position: chr18:33729754-33836567
Accession: 1921733
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0049334	KH_1	PF00013.29	1.8e-14	1	1
MGP_AJ_P0049323	KH_1	PF00013.29	4e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0049331	-	603	-	MGP_AJ_P0049331	110 (aa)	-	-
MGP_AJ_T0049336	-	860	-	MGP_AJ_P0049336	168 (aa)	-	-
MGP_AJ_T0049330	-	610	-	-	- (aa)	-	-
MGP_AJ_T0049335	-	2235	-	MGP_AJ_P0049335	636 (aa)	-	-
MGP_AJ_T0049324	-	8211	-	MGP_AJ_P0049324	2488 (aa)	-	-
MGP_AJ_T0049325	-	8244	-	MGP_AJ_P0049325	2488 (aa)	-	-
MGP_AJ_T0049326	-	485	-	-	- (aa)	-	-
MGP_AJ_T0049327	-	1005	-	MGP_AJ_P0049327	334 (aa)	-	-
MGP_AJ_T0049333	-	500	-	-	- (aa)	-	-
MGP_AJ_T0049332	-	523	-	MGP_AJ_P0049332	90 (aa)	-	-
MGP_AJ_T0049322	-	641	-	MGP_AJ_P0049322	213 (aa)	-	E9PUR0
MGP_AJ_T0049323	-	8234	-	MGP_AJ_P0049323	2551 (aa)	-	-
MGP_AJ_T0049334	-	3519	-	MGP_AJ_P0049334	1020 (aa)	-	-
MGP_AJ_T0049328	-	1033	-	-	- (aa)	-	-
MGP_AJ_T0049329	-	658	-	MGP_AJ_P0049329	218 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0024246	Ankhd1	67	84.211	MGP_AJ_G0029685	Ankrd17	69	86.878