EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0024369 (Gene tree)
Gene ID: -
Gene Symbol: Ythdc2
Alias: 3010002F02Rik|BC037178
Full Name: YTH domain containing 2
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Plus strand
Length: 61781 bases
Position: chr18:42029169-42090949
Accession: 2448561
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0049599	R3H	PF01424.22	1.4e-10	1	1
MGP_AJ_P0049599	DEAD	PF00270.29	2.6e-09	1	1
MGP_AJ_P0049599	YTH	PF04146.15	1.3e-42	1	1
MGP_AJ_P0049599	HA2	PF04408.23	6.7e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0049602	-	404	-	-	- (aa)	-	-
MGP_AJ_T0049599	-	7212	-	MGP_AJ_P0049599	1445 (aa)	-	B2RR83
MGP_AJ_T0049600	-	1312	-	-	- (aa)	-	-
MGP_AJ_T0049601	-	4302	-	MGP_AJ_P0049601	585 (aa)	-	-

Gene Model

Click here to download MGP_AJ_G0024369's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0024369's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0024369	Ythdc2	70	35.392	MGP_AJ_G0035322	Dhx30	56	47.236
MGP_AJ_G0024369	Ythdc2	90	35.912	MGP_AJ_G0016579	Dhx9	56	47.685
MGP_AJ_G0024369	Ythdc2	88	36.015	MGP_AJ_G0027219	Dhx36	80	41.667
MGP_AJ_G0024369	Ythdc2	69	31.785	MGP_AJ_G0029511	Dhx15	80	41.262
MGP_AJ_G0024369	Ythdc2	72	36.504	MGP_AJ_G0024017	Dhx57	55	50.800
MGP_AJ_G0024369	Ythdc2	89	32.714	MGP_AJ_G0020892	Dhx29	55	46.491