EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0024427 (Gene tree)
Gene ID: -
Gene Symbol: F830016B08Rik
Alias: Ifgga4
Full Name: RIKEN cDNA F830016B08 gene
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Plus strand
Length: 10694 bases
Position: chr18:57533339-57544032
Accession: 3588218
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0049742	MMR_HSR1	PF01926.23	3.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0049742	-	2787	XM_006525926	MGP_AJ_P0049742	417 (aa)	XP_006525989	G3UWE2

Gene Model

Click here to download MGP_AJ_G0024427's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0024427's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0024427	F830016B08Rik	88	30.526	MGP_AJ_G0018315	Igtp	85	30.628
MGP_AJ_G0024427	F830016B08Rik	88	34.211	MGP_AJ_G0031807	Irgc1	82	34.211
MGP_AJ_G0024427	F830016B08Rik	92	38.601	MGP_AJ_G0018186	Ifi47	92	38.601
MGP_AJ_G0024427	F830016B08Rik	93	46.310	MGP_AJ_G0018185	Tgtp2	94	46.310
MGP_AJ_G0024427	F830016B08Rik	93	46.310	MGP_AJ_G0018184	Tgtp1	94	46.310
MGP_AJ_G0024427	F830016B08Rik	93	52.273	MGP_AJ_G0018181	9930111J21Rik1	51	52.273
MGP_AJ_G0024427	F830016B08Rik	78	33.028	MGP_AJ_G0018178	Irgm1	75	33.028
MGP_AJ_G0024427	F830016B08Rik	84	56.818	MGP_AJ_G0018179	-	50	56.818
MGP_AJ_G0024427	F830016B08Rik	69	56.250	MGP_AJ_G0024424	-	98	56.250
MGP_AJ_G0024427	F830016B08Rik	97	54.705	MGP_AJ_G0024426	Gm4841	98	54.803
MGP_AJ_G0024427	F830016B08Rik	97	47.561	MGP_AJ_G0024425	Gm4951	99	47.561