EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0024569 (Gene tree)
Gene ID: -
Gene Symbol: Zfp236
Alias: AI447957|Gm335|LOC240456
Full Name: zinc finger protein 236
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Minus strand
Length: 101433 bases
Position: chr18:79983423-80084855
Accession: 1926950
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0050210	zf-C2H2	PF00096.26	1.1e-110	1	19
MGP_AJ_P0050210	zf-C2H2	PF00096.26	1.1e-110	2	19
MGP_AJ_P0050210	zf-C2H2	PF00096.26	1.1e-110	3	19
MGP_AJ_P0050210	zf-C2H2	PF00096.26	1.1e-110	4	19
MGP_AJ_P0050210	zf-C2H2	PF00096.26	1.1e-110	5	19
MGP_AJ_P0050210	zf-C2H2	PF00096.26	1.1e-110	6	19
MGP_AJ_P0050210	zf-C2H2	PF00096.26	1.1e-110	7	19
MGP_AJ_P0050210	zf-C2H2	PF00096.26	1.1e-110	8	19
MGP_AJ_P0050210	zf-C2H2	PF00096.26	1.1e-110	9	19
MGP_AJ_P0050210	zf-C2H2	PF00096.26	1.1e-110	10	19
MGP_AJ_P0050210	zf-C2H2	PF00096.26	1.1e-110	11	19
MGP_AJ_P0050210	zf-C2H2	PF00096.26	1.1e-110	12	19
MGP_AJ_P0050210	zf-C2H2	PF00096.26	1.1e-110	13	19
MGP_AJ_P0050210	zf-C2H2	PF00096.26	1.1e-110	14	19
MGP_AJ_P0050210	zf-C2H2	PF00096.26	1.1e-110	15	19
MGP_AJ_P0050210	zf-C2H2	PF00096.26	1.1e-110	16	19
MGP_AJ_P0050210	zf-C2H2	PF00096.26	1.1e-110	17	19
MGP_AJ_P0050210	zf-C2H2	PF00096.26	1.1e-110	18	19
MGP_AJ_P0050210	zf-C2H2	PF00096.26	1.1e-110	19	19
MGP_AJ_P0050207	zf-C2H2	PF00096.26	5.8e-108	1	18
MGP_AJ_P0050207	zf-C2H2	PF00096.26	5.8e-108	2	18
MGP_AJ_P0050207	zf-C2H2	PF00096.26	5.8e-108	3	18
MGP_AJ_P0050207	zf-C2H2	PF00096.26	5.8e-108	4	18
MGP_AJ_P0050207	zf-C2H2	PF00096.26	5.8e-108	5	18
MGP_AJ_P0050207	zf-C2H2	PF00096.26	5.8e-108	6	18
MGP_AJ_P0050207	zf-C2H2	PF00096.26	5.8e-108	7	18
MGP_AJ_P0050207	zf-C2H2	PF00096.26	5.8e-108	8	18
MGP_AJ_P0050207	zf-C2H2	PF00096.26	5.8e-108	9	18
MGP_AJ_P0050207	zf-C2H2	PF00096.26	5.8e-108	10	18
MGP_AJ_P0050207	zf-C2H2	PF00096.26	5.8e-108	11	18
MGP_AJ_P0050207	zf-C2H2	PF00096.26	5.8e-108	12	18
MGP_AJ_P0050207	zf-C2H2	PF00096.26	5.8e-108	13	18
MGP_AJ_P0050207	zf-C2H2	PF00096.26	5.8e-108	14	18
MGP_AJ_P0050207	zf-C2H2	PF00096.26	5.8e-108	15	18
MGP_AJ_P0050207	zf-C2H2	PF00096.26	5.8e-108	16	18
MGP_AJ_P0050207	zf-C2H2	PF00096.26	5.8e-108	17	18
MGP_AJ_P0050207	zf-C2H2	PF00096.26	5.8e-108	18	18
MGP_AJ_P0050213	zf-C2H2	PF00096.26	6.8e-06	1	1
MGP_AJ_P0050207	zf-met	PF12874.7	5.9e-06	1	4
MGP_AJ_P0050207	zf-met	PF12874.7	5.9e-06	2	4
MGP_AJ_P0050207	zf-met	PF12874.7	5.9e-06	3	4
MGP_AJ_P0050207	zf-met	PF12874.7	5.9e-06	4	4
MGP_AJ_P0050210	zf-met	PF12874.7	3.4e-05	1	4
MGP_AJ_P0050210	zf-met	PF12874.7	3.4e-05	2	4
MGP_AJ_P0050210	zf-met	PF12874.7	3.4e-05	3	4
MGP_AJ_P0050210	zf-met	PF12874.7	3.4e-05	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0050207	-	9626	XM_006526490	MGP_AJ_P0050207	1799 (aa)	XP_006526553	B2RR24
MGP_AJ_T0050209	-	3227	-	MGP_AJ_P0050209	42 (aa)	-	-
MGP_AJ_T0050208	-	9561	-	MGP_AJ_P0050208	1840 (aa)	-	-
MGP_AJ_T0050212	-	665	-	-	- (aa)	-	-
MGP_AJ_T0050213	-	410	-	MGP_AJ_P0050213	65 (aa)	-	-
MGP_AJ_T0050210	-	6059	-	MGP_AJ_P0050210	1847 (aa)	-	-
MGP_AJ_T0050211	-	6170	-	MGP_AJ_P0050211	485 (aa)	-	-

Gene Model

Click here to download MGP_AJ_G0024569's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0024569's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0024569	Zfp236	76	46.364	MGP_AJ_G0031800	Zfp93	89	43.119
MGP_AJ_G0024569	Zfp236	62	44.068	MGP_AJ_G0031801	Zfp61	57	42.857
MGP_AJ_G0024569	Zfp236	69	42.647	MGP_AJ_G0031802	Zfp94	76	42.647
MGP_AJ_G0024569	Zfp236	81	39.437	MGP_AJ_G0020671	Zfp748	92	41.905
MGP_AJ_G0024569	Zfp236	53	30.734	MGP_AJ_G0031553	Zfp784	79	40.244
MGP_AJ_G0024569	Zfp236	70	48.864	MGP_AJ_G0027082	Mynn	62	48.864
MGP_AJ_G0024569	Zfp236	73	37.143	MGP_AJ_G0023218	Zscan10	79	37.143
MGP_AJ_G0024569	Zfp236	80	38.732	MGP_AJ_G0023214	Zfp945	77	45.349
MGP_AJ_G0024569	Zfp236	72	44.545	MGP_AJ_G0026859	Zfp334	68	46.667
MGP_AJ_G0024569	Zfp236	61	41.228	MGP_AJ_G0026427	Zfp661	69	42.857
MGP_AJ_G0024569	Zfp236	68	48.148	MGP_AJ_G0020619	Gm5141	86	46.591
MGP_AJ_G0024569	Zfp236	71	41.228	MGP_AJ_G0033897	Zfp423	94	41.228
MGP_AJ_G0024569	Zfp236	69	42.727	MGP_AJ_G0029008	Zbtb17	61	42.727
MGP_AJ_G0024569	Zfp236	59	41.096	MGP_AJ_G0031542	Zfp628	61	42.500
MGP_AJ_G0024569	Zfp236	79	47.059	MGP_AJ_G0031967	Zfp420	99	47.059
MGP_AJ_G0024569	Zfp236	66	45.455	MGP_AJ_G0031148	Zfp637	85	51.807
MGP_AJ_G0024569	Zfp236	58	48.780	MGP_AJ_G0033015	Zfp768	53	45.536
MGP_AJ_G0024569	Zfp236	57	42.177	MGP_AJ_G0033019	E430018J23Rik	58	42.177
MGP_AJ_G0024569	Zfp236	61	47.674	MGP_AJ_G0020235	Zkscan4	52	47.674
MGP_AJ_G0024569	Zfp236	69	41.121	MGP_AJ_G0033748	Zfp882	87	45.652
MGP_AJ_G0024569	Zfp236	69	50.000	MGP_AJ_G0033747	Zfp709	85	43.750
MGP_AJ_G0024569	Zfp236	60	45.283	MGP_AJ_G0020653	Rslcan18	70	45.283
MGP_AJ_G0024569	Zfp236	80	46.575	MGP_AJ_G0020654	Zfp759	97	37.975
MGP_AJ_G0024569	Zfp236	62	43.023	MGP_AJ_G0029473	Zbtb49	62	47.887
MGP_AJ_G0024569	Zfp236	71	40.157	MGP_AJ_G0018368	Zfp867	94	45.902
MGP_AJ_G0024569	Zfp236	67	39.806	MGP_AJ_G0031795	Zfp112	52	42.742
MGP_AJ_G0024569	Zfp236	71	43.411	MGP_AJ_G0031796	Zfp235	67	43.411
MGP_AJ_G0024569	Zfp236	63	40.141	MGP_AJ_G0031797	Zfp114	68	40.141
MGP_AJ_G0024569	Zfp236	66	38.824	MGP_AJ_G0016535	Zbtb41	61	38.824
MGP_AJ_G0024569	Zfp236	81	41.758	MGP_AJ_G0030671	Repin1	99	41.667
MGP_AJ_G0024569	Zfp236	69	44.643	MGP_AJ_G0031550	Zfp865	78	44.643
MGP_AJ_G0024569	Zfp236	69	40.559	MGP_AJ_G0021971	Zfp251	79	40.559
MGP_AJ_G0024569	Zfp236	78	36.471	MGP_AJ_G0018319	Zfp672	96	41.096
MGP_AJ_G0024569	Zfp236	67	47.321	MGP_AJ_G0032098	Zfp141	64	47.826
MGP_AJ_G0024569	Zfp236	62	44.318	MGP_AJ_G0034459	Zfp872	94	40.800
MGP_AJ_G0024569	Zfp236	59	41.748	MGP_AJ_G0018955	Zfp652	60	41.748
MGP_AJ_G0024569	Zfp236	57	36.242	MGP_AJ_G0034206	Snai3	67	47.297
MGP_AJ_G0024569	Zfp236	78	40.690	MGP_AJ_G0033966	Zfp319	87	40.690
MGP_AJ_G0024569	Zfp236	77	43.860	MGP_AJ_G0030801	Prdm5	87	46.739
MGP_AJ_G0024569	Zfp236	78	41.667	MGP_AJ_G0026897	Zfp64	70	42.500
MGP_AJ_G0024569	Zfp236	81	53.333	MGP_AJ_G0026896	Sall4	73	53.333
MGP_AJ_G0024569	Zfp236	54	46.739	MGP_AJ_G0029808	Gfi1	100	46.739
MGP_AJ_G0024569	Zfp236	86	31.818	MGP_AJ_G0017149	Zbtb24	54	45.794
MGP_AJ_G0024569	Zfp236	71	35.669	MGP_AJ_G0031251	Zfp384	68	38.655
MGP_AJ_G0024569	Zfp236	69	42.222	MGP_AJ_G0023194	Zfp677	78	45.455
MGP_AJ_G0024569	Zfp236	75	45.283	MGP_AJ_G0023196	Zfp51	75	45.283
MGP_AJ_G0024569	Zfp236	63	42.697	MGP_AJ_G0018223	Zfp454	75	42.982
MGP_AJ_G0024569	Zfp236	63	42.500	MGP_AJ_G0031832	Zfp574	95	41.304
MGP_AJ_G0024569	Zfp236	75	34.940	MGP_AJ_G0033042	Zfp646	90	34.940
MGP_AJ_G0024569	Zfp236	79	41.176	MGP_AJ_G0031904	Zfp974	87	45.652
MGP_AJ_G0024569	Zfp236	74	42.857	MGP_AJ_G0032102	Zfp715	69	41.935
MGP_AJ_G0024569	Zfp236	60	45.652	MGP_AJ_G0034123	Zfp1	67	45.652