EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0024637 (Gene tree)
Gene ID: -
Gene Symbol: Gm21992
Alias: Rbm14|Rbm14-rbm4|Rbm4 fusionGN
Full Name: predicted gene 21992
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Minus strand
Length: 68889 bases
Position: chr19:1560565-1629453
Accession: 5439461
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0050471	zf-CCHC	PF00098.23	2.5e-07	1	1
MGP_AJ_P0050475	RRM_1	PF00076.22	1.9e-31	1	3
MGP_AJ_P0050475	RRM_1	PF00076.22	1.9e-31	2	3
MGP_AJ_P0050475	RRM_1	PF00076.22	1.9e-31	3	3
MGP_AJ_P0050471	RRM_1	PF00076.22	9.8e-18	1	2
MGP_AJ_P0050471	RRM_1	PF00076.22	9.8e-18	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0050472	-	456	-	MGP_AJ_P0050472	19 (aa)	-	-
MGP_AJ_T0050471	-	1435	-	MGP_AJ_P0050471	336 (aa)	-	-
MGP_AJ_T0050463	-	2590	-	MGP_AJ_P0050463	118 (aa)	-	B0LM42
MGP_AJ_T0050475	-	1310	-	MGP_AJ_P0050475	435 (aa)	-	-
MGP_AJ_T0050478	-	2310	-	-	- (aa)	-	-
MGP_AJ_T0050479	-	531	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_AJ_G0024637's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0024637's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0024637	Gm21992	90	31.061	MGP_AJ_G0017470	Dazap1	78	30.147
MGP_AJ_G0024637	Gm21992	73	100.000	MGP_AJ_G0024639	-	100	100.000
MGP_AJ_G0024637	Gm21992	91	57.576	MGP_AJ_G0024638	Rbm4b	99	68.198
MGP_AJ_G0024637	Gm21992	100	96.610	MGP_AJ_G0024640	Rbm14	97	99.130