EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0024638 (Gene tree)
Gene ID: -
Gene Symbol: Rbm4b
Alias: 4921506I22Rik|AI504630|AI506404|Lark2|Neosin|Rbm30
Full Name: RNA binding motif protein 4B
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Plus strand
Length: 10316 bases
Position: chr19:1574195-1584510
Accession: 1913954
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0050466	zf-CCHC	PF00098.23	2.7e-07	1	1
MGP_AJ_P0050466	RRM_1	PF00076.22	1.6e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0050465	-	3945	-	-	- (aa)	-	-
MGP_AJ_T0050464	-	1215	-	-	- (aa)	-	-
MGP_AJ_T0050467	-	2881	-	MGP_AJ_P0050467	76 (aa)	-	-
MGP_AJ_T0050466	-	1557	-	MGP_AJ_P0050466	281 (aa)	-	-
MGP_AJ_T0050469	-	407	-	-	- (aa)	-	-
MGP_AJ_T0050468	-	5672	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_AJ_G0024638's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0024638's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0024638	Rbm4b	95	31.250	MGP_AJ_G0028539	Elavl4	58	31.250
MGP_AJ_G0024638	Rbm4b	99	68.198	MGP_AJ_G0024637	Gm21992	91	57.576
MGP_AJ_G0024638	Rbm4b	76	30.882	MGP_AJ_G0025309	Celf2	74	30.882
MGP_AJ_G0024638	Rbm4b	80	33.333	MGP_AJ_G0035731	Rbmx	75	33.766
MGP_AJ_G0024638	Rbm4b	79	30.882	MGP_AJ_G0017464	Cirbp	68	30.137
MGP_AJ_G0024638	Rbm4b	50	44.737	MGP_AJ_G0021356	Pspc1	66	44.737
MGP_AJ_G0024638	Rbm4b	83	36.508	MGP_AJ_G0026779	Srsf6	50	35.294
MGP_AJ_G0024638	Rbm4b	82	55.738	MGP_AJ_G0024640	Rbm14	90	57.576