EuRBPDB

Description

Ensembl ID: MGP_AJ_G0024982 (Gene tree)
Gene ID: -
Gene Symbol: Smarca2
Alias: 2610209L14Rik|SNF2alpha|Snf2l2|brahma|brm
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 2
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Plus strand
Length: 179449 bases
Position: chr19:23616863-23796311
Accession: 99603
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0051416	ResIII	PF04851.15	3.9e-08	1	1
MGP_AJ_P0051417	ResIII	PF04851.15	4e-08	1	1
MGP_AJ_P0051416	BRK	PF07533.16	3.7e-17	1	1
MGP_AJ_P0051417	BRK	PF07533.16	3.8e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0051431	-	968	-	MGP_AJ_P0051431	119 (aa)	-	-
MGP_AJ_T0051419	-	661	-	-	- (aa)	-	-
MGP_AJ_T0051418	-	863	-	MGP_AJ_P0051418	212 (aa)	-	-
MGP_AJ_T0051430	-	1460	-	MGP_AJ_P0051430	113 (aa)	-	-
MGP_AJ_T0051426	-	1858	-	MGP_AJ_P0051426	236 (aa)	-	-
MGP_AJ_T0051427	-	879	-	MGP_AJ_P0051427	276 (aa)	-	-
MGP_AJ_T0051424	-	942	-	MGP_AJ_P0051424	254 (aa)	-	-
MGP_AJ_T0051425	-	788	-	MGP_AJ_P0051425	224 (aa)	-	-
MGP_AJ_T0051422	-	426	-	-	- (aa)	-	-
MGP_AJ_T0051423	-	929	-	MGP_AJ_P0051423	254 (aa)	-	-
MGP_AJ_T0051420	-	1356	-	-	- (aa)	-	-
MGP_AJ_T0051421	-	867	-	-	- (aa)	-	-
MGP_AJ_T0051417	-	5862	-	MGP_AJ_P0051417	1601 (aa)	-	-
MGP_AJ_T0051416	-	5858	XM_006527281	MGP_AJ_P0051416	1583 (aa)	XP_006527344	A0A140LHE2
MGP_AJ_T0051432	-	736	-	MGP_AJ_P0051432	119 (aa)	-	-
MGP_AJ_T0051428	-	835	-	MGP_AJ_P0051428	235 (aa)	-	-
MGP_AJ_T0051429	-	490	-	MGP_AJ_P0051429	83 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0024982	Smarca2	70	80.240	MGP_AJ_G0034437	Smarca4	92	79.726