EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0025309 (Gene tree)
Gene ID: -
Gene Symbol: Celf2
Alias: B230218O03|B230345P09Rik|C88023|CELF-2|CUG-BP2|Cugbp2|D230046B21Rik|ETR-3|Etr-3|Napor|Napor-2|mETR-3
Full Name: CUGBP%2C Elav-like family member 2
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Minus strand
Length: 957608 bases
Position: chr2:3533016-4490623
Accession: 1338822
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0052468	RRM_1	PF00076.22	2.5e-51	1	3
MGP_AJ_P0052468	RRM_1	PF00076.22	2.5e-51	2	3
MGP_AJ_P0052468	RRM_1	PF00076.22	2.5e-51	3	3
MGP_AJ_P0052471	RRM_1	PF00076.22	2.5e-51	1	3
MGP_AJ_P0052471	RRM_1	PF00076.22	2.5e-51	2	3
MGP_AJ_P0052471	RRM_1	PF00076.22	2.5e-51	3	3
MGP_AJ_P0052477	RRM_1	PF00076.22	2.6e-51	1	3
MGP_AJ_P0052477	RRM_1	PF00076.22	2.6e-51	2	3
MGP_AJ_P0052477	RRM_1	PF00076.22	2.6e-51	3	3
MGP_AJ_P0052479	RRM_1	PF00076.22	2.6e-51	1	3
MGP_AJ_P0052479	RRM_1	PF00076.22	2.6e-51	2	3
MGP_AJ_P0052479	RRM_1	PF00076.22	2.6e-51	3	3
MGP_AJ_P0052478	RRM_1	PF00076.22	2.7e-51	1	3
MGP_AJ_P0052478	RRM_1	PF00076.22	2.7e-51	2	3
MGP_AJ_P0052478	RRM_1	PF00076.22	2.7e-51	3	3
MGP_AJ_P0052474	RRM_1	PF00076.22	3.1e-51	1	3
MGP_AJ_P0052474	RRM_1	PF00076.22	3.1e-51	2	3
MGP_AJ_P0052474	RRM_1	PF00076.22	3.1e-51	3	3
MGP_AJ_P0052470	RRM_1	PF00076.22	3.3e-51	1	3
MGP_AJ_P0052470	RRM_1	PF00076.22	3.3e-51	2	3
MGP_AJ_P0052470	RRM_1	PF00076.22	3.3e-51	3	3
MGP_AJ_P0052472	RRM_1	PF00076.22	3.3e-51	1	3
MGP_AJ_P0052472	RRM_1	PF00076.22	3.3e-51	2	3
MGP_AJ_P0052472	RRM_1	PF00076.22	3.3e-51	3	3
MGP_AJ_P0052476	RRM_1	PF00076.22	3.4e-51	1	3
MGP_AJ_P0052476	RRM_1	PF00076.22	3.4e-51	2	3
MGP_AJ_P0052476	RRM_1	PF00076.22	3.4e-51	3	3
MGP_AJ_P0052475	RRM_1	PF00076.22	4.9e-39	1	3
MGP_AJ_P0052475	RRM_1	PF00076.22	4.9e-39	2	3
MGP_AJ_P0052475	RRM_1	PF00076.22	4.9e-39	3	3
MGP_AJ_P0052480	RRM_1	PF00076.22	5.9e-39	1	3
MGP_AJ_P0052480	RRM_1	PF00076.22	5.9e-39	2	3
MGP_AJ_P0052480	RRM_1	PF00076.22	5.9e-39	3	3
MGP_AJ_P0052469	RRM_1	PF00076.22	6.2e-39	1	3
MGP_AJ_P0052469	RRM_1	PF00076.22	6.2e-39	2	3
MGP_AJ_P0052469	RRM_1	PF00076.22	6.2e-39	3	3
MGP_AJ_P0052473	RRM_1	PF00076.22	6.6e-39	1	3
MGP_AJ_P0052473	RRM_1	PF00076.22	6.6e-39	2	3
MGP_AJ_P0052473	RRM_1	PF00076.22	6.6e-39	3	3
MGP_AJ_P0052487	RRM_1	PF00076.22	7.5e-19	1	1
MGP_AJ_P0052483	RRM_1	PF00076.22	2.4e-15	1	1
MGP_AJ_P0052490	RRM_1	PF00076.22	2.2e-14	1	1
MGP_AJ_P0052492	RRM_1	PF00076.22	1.1e-13	1	1
MGP_AJ_P0052493	RRM_1	PF00076.22	0.00013	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0052481	-	1996	-	MGP_AJ_P0052481	443 (aa)	-	-
MGP_AJ_T0052480	-	2177	-	MGP_AJ_P0052480	460 (aa)	-	-
MGP_AJ_T0052483	-	1024	-	MGP_AJ_P0052483	276 (aa)	-	-
MGP_AJ_T0052482	-	1240	-	-	- (aa)	-	-
MGP_AJ_T0052485	-	405	-	-	- (aa)	-	-
MGP_AJ_T0052484	-	4798	-	-	- (aa)	-	-
MGP_AJ_T0052487	-	630	-	MGP_AJ_P0052487	134 (aa)	-	-
MGP_AJ_T0052486	-	923	-	-	- (aa)	-	-
MGP_AJ_T0052489	-	2075	-	-	- (aa)	-	-
MGP_AJ_T0052488	-	4802	-	-	- (aa)	-	-
MGP_AJ_T0052469	-	8852	-	MGP_AJ_P0052469	478 (aa)	-	-
MGP_AJ_T0052468	-	7714	XM_006497333	MGP_AJ_P0052468	484 (aa)	XP_006497396	Q9Z0H4
MGP_AJ_T0052494	-	1972	-	-	- (aa)	-	-
MGP_AJ_T0052495	-	769	-	-	- (aa)	-	-
MGP_AJ_T0052492	-	529	-	MGP_AJ_P0052492	159 (aa)	-	-
MGP_AJ_T0052493	-	331	-	MGP_AJ_P0052493	46 (aa)	-	-
MGP_AJ_T0052490	-	402	-	MGP_AJ_P0052490	92 (aa)	-	-
MGP_AJ_T0052491	-	4143	-	-	- (aa)	-	-
MGP_AJ_T0052470	-	8734	-	MGP_AJ_P0052470	526 (aa)	-	-
MGP_AJ_T0052471	-	7487	-	MGP_AJ_P0052471	484 (aa)	-	-
MGP_AJ_T0052472	-	5466	-	MGP_AJ_P0052472	526 (aa)	-	-
MGP_AJ_T0052473	-	3853	-	MGP_AJ_P0052473	472 (aa)	-	-
MGP_AJ_T0052474	-	3587	-	MGP_AJ_P0052474	508 (aa)	-	-
MGP_AJ_T0052475	-	2223	-	MGP_AJ_P0052475	440 (aa)	-	-
MGP_AJ_T0052476	-	2525	-	MGP_AJ_P0052476	520 (aa)	-	-
MGP_AJ_T0052477	-	1721	-	MGP_AJ_P0052477	488 (aa)	-	-
MGP_AJ_T0052478	-	2338	-	MGP_AJ_P0052478	490 (aa)	-	-
MGP_AJ_T0052479	-	2332	-	MGP_AJ_P0052479	488 (aa)	-	-

Gene Model

Click here to download MGP_AJ_G0025309's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0025309's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0025309	Celf2	100	88.060	MGP_AJ_G0026098	Celf1	100	80.082
MGP_AJ_G0025309	Celf2	74	30.882	MGP_AJ_G0024638	Rbm4b	76	30.882
MGP_AJ_G0025309	Celf2	92	53.659	MGP_AJ_G0017538	Celf5	93	59.770
MGP_AJ_G0025309	Celf2	90	55.556	MGP_AJ_G0024174	Celf4	100	41.787
MGP_AJ_G0025309	Celf2	57	35.714	MGP_AJ_G0021757	Pabpc1	51	34.884
MGP_AJ_G0025309	Celf2	77	39.474	MGP_AJ_G0035381	Rbms3	75	37.079
MGP_AJ_G0025309	Celf2	82	33.333	MGP_AJ_G0017464	Cirbp	80	32.558
MGP_AJ_G0025309	Celf2	94	83.333	MGP_AJ_G0027512	Celf3	90	55.801
MGP_AJ_G0025309	Celf2	64	43.210	MGP_AJ_G0033314	Elavl1	81	43.210
MGP_AJ_G0025309	Celf2	57	34.211	MGP_AJ_G0023107	Pabpc6	51	34.211
MGP_AJ_G0025309	Celf2	51	35.443	MGP_AJ_G0030941	Tia1	83	35.443
MGP_AJ_G0025309	Celf2	79	80.952	MGP_AJ_G0034883	Celf6	91	45.567
MGP_AJ_G0025309	Celf2	77	39.474	MGP_AJ_G0017824	Rbms2	51	39.474
MGP_AJ_G0025309	Celf2	61	35.714	MGP_AJ_G0016018	Boll	57	32.000
MGP_AJ_G0025309	Celf2	82	34.667	MGP_AJ_G0034452	Elavl3	73	40.741
MGP_AJ_G0025309	Celf2	61	38.272	MGP_AJ_G0028539	Elavl4	81	38.272
MGP_AJ_G0025309	Celf2	87	33.333	MGP_AJ_G0028407	Elavl2	83	39.506
MGP_AJ_G0025309	Celf2	57	34.884	MGP_AJ_G0026800	Pabpc1l	53	34.884
MGP_AJ_G0025309	Celf2	88	32.099	MGP_AJ_G0035731	Rbmx	78	30.000
MGP_AJ_G0025309	Celf2	61	34.177	MGP_AJ_G0033065	Tial1	65	31.481