EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0025344 (Gene tree)
Gene ID: -
Gene Symbol: Arl5b
Alias: 4930587A11Rik|AW146430|Arl8
Full Name: ADP-ribosylation factor-like 5B
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Plus strand
Length: 33394 bases
Position: chr2:12128512-12161905
Accession: 1923119
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0052700	MMR_HSR1	PF01926.23	8.5e-07	1	1
MGP_AJ_P0052702	MMR_HSR1	PF01926.23	9.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0052702	-	6979	-	MGP_AJ_P0052702	180 (aa)	-	-
MGP_AJ_T0052703	-	1035	-	MGP_AJ_P0052703	40 (aa)	-	-
MGP_AJ_T0052700	-	6931	XM_017319316	MGP_AJ_P0052700	171 (aa)	XP_017174805	A0A0A6YWH0
MGP_AJ_T0052706	-	3210	-	-	- (aa)	-	-
MGP_AJ_T0052707	-	706	-	MGP_AJ_P0052707	56 (aa)	-	-
MGP_AJ_T0052704	-	481	-	MGP_AJ_P0052704	35 (aa)	-	-
MGP_AJ_T0052705	-	778	-	MGP_AJ_P0052705	30 (aa)	-	-

Gene Model

Click here to download MGP_AJ_G0025344's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0025344's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0025344	Arl5b	94	39.759	MGP_AJ_G0019178	Arl4d	83	39.759
MGP_AJ_G0025344	Arl5b	96	44.512	MGP_AJ_G0024717	Arl2	90	44.242
MGP_AJ_G0025344	Arl5b	83	30.667	MGP_AJ_G0031071	Arl8b	78	30.667
MGP_AJ_G0025344	Arl5b	98	50.282	MGP_AJ_G0018362	Arf1	98	50.282
MGP_AJ_G0025344	Arl5b	96	37.500	MGP_AJ_G0027256	Arl14	90	37.500
MGP_AJ_G0025344	Arl5b	94	43.373	MGP_AJ_G0019665	Arl4a	85	43.787
MGP_AJ_G0025344	Arl5b	92	37.126	MGP_AJ_G0026986	Arfrp1	84	40.196
MGP_AJ_G0025344	Arl5b	96	50.000	MGP_AJ_G0017610	Arl1	99	48.889
MGP_AJ_G0025344	Arl5b	67	30.952	MGP_AJ_G0026926	Rab22a	61	30.952
MGP_AJ_G0025344	Arl5b	97	74.286	MGP_AJ_G0019014	Arl5c	98	74.286
MGP_AJ_G0025344	Arl5b	99	43.094	MGP_AJ_G0025187	Arl3	99	43.094
MGP_AJ_G0025344	Arl5b	98	49.718	MGP_AJ_G0019239	Arf2	98	49.718
MGP_AJ_G0025344	Arl5b	93	40.000	MGP_AJ_G0021398	Arl11	91	40.000
MGP_AJ_G0025344	Arl5b	65	34.211	MGP_AJ_G0020525	Arl10	55	34.211
MGP_AJ_G0025344	Arl5b	92	39.506	MGP_AJ_G0022900	Arl6	89	39.157
MGP_AJ_G0025344	Arl5b	98	49.718	MGP_AJ_G0022267	Arf3	98	49.718
MGP_AJ_G0025344	Arl5b	90	42.593	MGP_AJ_G0016269	Arl4c	85	42.169
MGP_AJ_G0025344	Arl5b	98	81.437	MGP_AJ_G0025710	Arl5a	100	79.888
MGP_AJ_G0025344	Arl5b	84	33.562	MGP_AJ_G0016500	Arl8a	78	33.553