EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0025564 (Gene tree)
Gene ID: -
Gene Symbol: Fubp3
Alias: A330051M14Rik|AV006371|FBP3|Marta2
Full Name: far upstream element (FUSE) binding protein 3
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Plus strand
Length: 45518 bases
Position: chr2:28690203-28735720
Accession: 2443699
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0053987	KH_1	PF00013.29	1e-68	1	4
MGP_AJ_P0053987	KH_1	PF00013.29	1e-68	2	4
MGP_AJ_P0053987	KH_1	PF00013.29	1e-68	3	4
MGP_AJ_P0053987	KH_1	PF00013.29	1e-68	4	4
MGP_AJ_P0053991	KH_1	PF00013.29	1.1e-68	1	4
MGP_AJ_P0053991	KH_1	PF00013.29	1.1e-68	2	4
MGP_AJ_P0053991	KH_1	PF00013.29	1.1e-68	3	4
MGP_AJ_P0053991	KH_1	PF00013.29	1.1e-68	4	4
MGP_AJ_P0053994	KH_1	PF00013.29	7.6e-19	1	1
MGP_AJ_P0053990	KH_1	PF00013.29	8.1e-11	1	1
MGP_AJ_P0053987	KH_2	PF07650.17	7.8e-21	1	1
MGP_AJ_P0053991	KH_2	PF07650.17	8e-21	1	1
MGP_AJ_P0053994	KH_2	PF07650.17	1.4e-05	1	1
MGP_AJ_P0053995	DUF1897	PF09005.10	4.2e-09	1	2
MGP_AJ_P0053995	DUF1897	PF09005.10	4.2e-09	2	2
MGP_AJ_P0053996	DUF1897	PF09005.10	0.00011	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0053989	-	1909	-	-	- (aa)	-	-
MGP_AJ_T0053988	-	372	-	MGP_AJ_P0053988	97 (aa)	-	-
MGP_AJ_T0053990	-	425	-	MGP_AJ_P0053990	123 (aa)	-	-
MGP_AJ_T0053991	-	3648	-	MGP_AJ_P0053991	575 (aa)	-	-
MGP_AJ_T0053992	-	453	-	MGP_AJ_P0053992	83 (aa)	-	-
MGP_AJ_T0053993	-	908	-	MGP_AJ_P0053993	191 (aa)	-	-
MGP_AJ_T0053987	-	3270	XM_006498126	MGP_AJ_P0053987	569 (aa)	XP_006498189	A0A0A6YVV5
MGP_AJ_T0053995	-	843	-	MGP_AJ_P0053995	103 (aa)	-	-
MGP_AJ_T0053996	-	437	-	MGP_AJ_P0053996	52 (aa)	-	-
MGP_AJ_T0053997	-	2342	-	-	- (aa)	-	-
MGP_AJ_T0053994	-	1073	-	MGP_AJ_P0053994	263 (aa)	-	-

Gene Model

Click here to download MGP_AJ_G0025564's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0025564's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0025564	Fubp3	95	58.824	MGP_AJ_G0023907	Khsrp	84	48.682
MGP_AJ_G0025564	Fubp3	77	31.973	MGP_AJ_G0017367	Pcbp3	85	31.973
MGP_AJ_G0025564	Fubp3	96	64.324	MGP_AJ_G0027947	Fubp1	94	59.208
MGP_AJ_G0025564	Fubp3	70	36.000	MGP_AJ_G0035211	Pcbp4	83	36.000
MGP_AJ_G0025564	Fubp3	58	30.000	MGP_AJ_G0022628	Igf2bp2	66	30.000
MGP_AJ_G0025564	Fubp3	88	32.370	MGP_AJ_G0030944	Pcbp1	60	31.169