EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0025740 (Gene tree)
Gene ID: -
Gene Symbol: Rbms1
Alias: 2600014B10Rik|AI255215|MSSP-1|MSSP-2|MSSP-3|Mssp|Mssp1|YC1
Full Name: RNA binding motif%2C single stranded interacting protein 1
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Minus strand
Length: 215570 bases
Position: chr2:58039409-58254978
Accession: 1861774
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0054958	RRM_1	PF00076.22	1.7e-32	1	2
MGP_AJ_P0054958	RRM_1	PF00076.22	1.7e-32	2	2
MGP_AJ_P0054957	RRM_1	PF00076.22	1.8e-32	1	2
MGP_AJ_P0054957	RRM_1	PF00076.22	1.8e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0054957	-	4088	XM_006499940	MGP_AJ_P0054957	417 (aa)	XP_006500003	Q91W59
MGP_AJ_T0054964	-	123	-	-	- (aa)	-	-
MGP_AJ_T0054960	-	757	-	-	- (aa)	-	-
MGP_AJ_T0054961	-	224	-	-	- (aa)	-	-
MGP_AJ_T0054962	-	217	-	-	- (aa)	-	-
MGP_AJ_T0054963	-	202	-	-	- (aa)	-	-
MGP_AJ_T0054959	-	644	-	-	- (aa)	-	-
MGP_AJ_T0054958	-	4467	-	MGP_AJ_P0054958	403 (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0025740's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0025740	Rbms1	94	68.063	MGP_AJ_G0017824	Rbms2	86	71.758
MGP_AJ_G0025740	Rbms1	51	33.645	MGP_AJ_G0034452	Elavl3	50	36.207
MGP_AJ_G0025740	Rbms1	53	32.773	MGP_AJ_G0028539	Elavl4	70	36.458
MGP_AJ_G0025740	Rbms1	96	71.538	MGP_AJ_G0035381	Rbms3	99	80.841