EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_AJ_G0025784 (Gene tree)
Gene ID
-
Gene Symbol
Ssb
Alias
La protein|SS-B|Ss-b|autoantigen La
Full Name
Sjogren syndrome antigen B
Gene Type
protein_coding
Species
Mus_musculus_aj
Status
putative
Strand
Plus strand
Length
10286 bases
Position
chr2:67165030-67175315
Accession
98423
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_AJ_P0055188RRM_1PF00076.224.1e-1211
MGP_AJ_P0055189RRM_1PF00076.224.1e-1211
MGP_AJ_P0055191RRM_1PF00076.227.1e-1011
MGP_AJ_P0055193RRM_3PF08777.112.8e-2811
MGP_AJ_P0055188RRM_3PF08777.117.2e-2811
MGP_AJ_P0055189RRM_3PF08777.117.2e-2811
MGP_AJ_P0055191LaPF05383.172.7e-2211
MGP_AJ_P0055188LaPF05383.177.7e-2211
MGP_AJ_P0055189LaPF05383.177.7e-2211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_AJ_T0055192-666--- (aa)--
MGP_AJ_T0055193-991-MGP_AJ_P0055193229 (aa)--
MGP_AJ_T0055190-1563-MGP_AJ_P0055190159 (aa)--
MGP_AJ_T0055191-634-MGP_AJ_P0055191184 (aa)--
MGP_AJ_T0055189-2088-MGP_AJ_P0055189415 (aa)--
MGP_AJ_T0055188-2001XM_006499069MGP_AJ_P0055188415 (aa)XP_006499132P32067
Gene Model
Click here to download MGP_AJ_G0025784's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0025784's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_AJ_G0025784Ssb6938.182MGP_AJ_G0027819Larp76347.059

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