EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0025834 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Plus strand
Length: 9837 bases
Position: chr2:73046756-73056592
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0055440	RRM_1	PF00076.22	1.3e-51	1	3
MGP_AJ_P0055440	RRM_1	PF00076.22	1.3e-51	2	3
MGP_AJ_P0055440	RRM_1	PF00076.22	1.3e-51	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0055440	-	4803	-	MGP_AJ_P0055440	420 (aa)	-	-
MGP_AJ_T0055441	-	753	-	MGP_AJ_P0055441	194 (aa)	-	-

Gene Model

Click here to download MGP_AJ_G0025834's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0025834's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0025834	-	50	58.333	MGP_AJ_G0018892	Msi2	100	40.870
MGP_AJ_G0025834	-	56	35.632	MGP_AJ_G0018238	Hnrnpab	61	35.971
MGP_AJ_G0025834	-	63	68.205	MGP_AJ_G0030704	Hnrnpa2b1	59	82.418
MGP_AJ_G0025834	-	60	40.385	MGP_AJ_G0029933	Msi1	59	40.299
MGP_AJ_G0025834	-	55	31.959	MGP_AJ_G0034883	Celf6	76	31.959
MGP_AJ_G0025834	-	60	48.333	MGP_AJ_G0017464	Cirbp	76	46.875
MGP_AJ_G0025834	-	62	35.897	MGP_AJ_G0029094	Tardbp	79	35.897
MGP_AJ_G0025834	-	59	36.364	MGP_AJ_G0017470	Dazap1	100	36.364
MGP_AJ_G0025834	-	66	40.291	MGP_AJ_G0029746	Hnrnpd	97	40.909